BLASTX nr result

ID: Atractylodes21_contig00054358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054358
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]   151   6e-35
ref|XP_002319373.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   144   7e-33
ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containi...   144   7e-33

>ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73710-like
            [Vitis vinifera]
          Length = 1008

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/100 (74%), Positives = 87/100 (87%)
 Frame = -2

Query: 304  NSMLNLYADLGMVSEARLIFDDLQEHLQADGVSFATMMYAYKNMGMLDEAIQVAEEMKDS 125
            NSM+NLYADLG+VSEA+LIFDDL++   ADGVSFATMMY YKN+GMLDEAI VA+EMK S
Sbjct: 733  NSMINLYADLGLVSEAKLIFDDLRQKGSADGVSFATMMYLYKNLGMLDEAIDVADEMKQS 792

Query: 124  GLLTDCPSFNKAMACYATSGHLVECGEMLHDMIVTRKLLP 5
            GLL DC SFNK MACYAT+G L  CGE+LH+MI +R++LP
Sbjct: 793  GLLRDCASFNKVMACYATNGQLSACGELLHEMI-SRRILP 831


>emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
          Length = 1313

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/100 (73%), Positives = 86/100 (86%)
 Frame = -2

Query: 304  NSMLNLYADLGMVSEARLIFDDLQEHLQADGVSFATMMYAYKNMGMLDEAIQVAEEMKDS 125
            NSM+NLYADLG+VSEA+LIFDDL++   ADGVSFATMMY YKN+GMLDEAI VA+EMK S
Sbjct: 1038 NSMINLYADLGLVSEAKLIFDDLRQKGSADGVSFATMMYLYKNLGMLDEAIDVADEMKQS 1097

Query: 124  GLLTDCPSFNKAMACYATSGHLVECGEMLHDMIVTRKLLP 5
            G L DC SFNK MACYAT+G L  CGE+LH+MI +R++LP
Sbjct: 1098 GFLRDCASFNKVMACYATNGQLSACGELLHEMI-SRRILP 1136


>ref|XP_002319373.1| predicted protein [Populus trichocarpa] gi|222857749|gb|EEE95296.1|
           predicted protein [Populus trichocarpa]
          Length = 810

 Score =  147 bits (370), Expect = 1e-33
 Identities = 72/100 (72%), Positives = 86/100 (86%)
 Frame = -2

Query: 304 NSMLNLYADLGMVSEARLIFDDLQEHLQADGVSFATMMYAYKNMGMLDEAIQVAEEMKDS 125
           NSM++LYADLGM+SEA L+F +L+E+ QADGVSFATMMY YK+MGMLDEAI +AEEMK S
Sbjct: 521 NSMISLYADLGMISEAELVFKNLRENGQADGVSFATMMYLYKSMGMLDEAIDIAEEMKQS 580

Query: 124 GLLTDCPSFNKAMACYATSGHLVECGEMLHDMIVTRKLLP 5
           GLL DC S+NK MACYAT+G L EC E+LH+MI  +KLLP
Sbjct: 581 GLLRDCVSYNKVMACYATNGQLRECAELLHEMI-GQKLLP 619


>ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g73710-like [Cucumis sativus]
          Length = 1026

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/100 (71%), Positives = 85/100 (85%)
 Frame = -2

Query: 304  NSMLNLYADLGMVSEARLIFDDLQEHLQADGVSFATMMYAYKNMGMLDEAIQVAEEMKDS 125
            NSM+NLYADLGMVSEA+ +F+DL+E   ADGVSFATM+Y YKN+GMLDEAI+VAEEMK+S
Sbjct: 710  NSMINLYADLGMVSEAKQVFEDLRERGYADGVSFATMIYLYKNIGMLDEAIEVAEEMKES 769

Query: 124  GLLTDCPSFNKAMACYATSGHLVECGEMLHDMIVTRKLLP 5
            GLL D  SF K + CYA +G + ECGE+LH+M VTRKLLP
Sbjct: 770  GLLRDATSFRKVIECYAINGQVRECGELLHEM-VTRKLLP 808


>ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73710-like
            [Cucumis sativus]
          Length = 1020

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/100 (71%), Positives = 85/100 (85%)
 Frame = -2

Query: 304  NSMLNLYADLGMVSEARLIFDDLQEHLQADGVSFATMMYAYKNMGMLDEAIQVAEEMKDS 125
            NSM+NLYADLGMVSEA+ +F+DL+E   ADGVSFATM+Y YKN+GMLDEAI+VAEEMK+S
Sbjct: 710  NSMINLYADLGMVSEAKQVFEDLRERGYADGVSFATMIYLYKNIGMLDEAIEVAEEMKES 769

Query: 124  GLLTDCPSFNKAMACYATSGHLVECGEMLHDMIVTRKLLP 5
            GLL D  SF K + CYA +G + ECGE+LH+M VTRKLLP
Sbjct: 770  GLLRDATSFRKVIECYAINGQVRECGELLHEM-VTRKLLP 808


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