BLASTX nr result

ID: Atractylodes21_contig00054352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054352
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301472.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002531881.1| peripheral-type benzodiazepine receptor, put...    96   2e-18
gb|AFH57280.1| putative peripheral-type benzodiazepine receptor ...    94   1e-17
emb|CAH10765.1| peripheral-type benzodiazepine receptor [Solanum...    91   7e-17

>ref|XP_002301472.1| predicted protein [Populus trichocarpa]
           gi|224100985|ref|XP_002334319.1| predicted protein
           [Populus trichocarpa] gi|222843198|gb|EEE80745.1|
           predicted protein [Populus trichocarpa]
           gi|222870389|gb|EEF07520.1| predicted protein [Populus
           trichocarpa]
          Length = 197

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 5/76 (6%)
 Frame = -2

Query: 215 SMPRRGIWSLGVGIAVPLALTLANISLFGWNRSYQTSH-----KPFWVPPLWSLHLTCLT 51
           +M +RGI SL + +A+PL+L L N+  FG  + Y TS      KPFW PPLW+LH+TC+T
Sbjct: 38  AMAQRGIRSLAIAVALPLSLALCNVYFFGSTKGYGTSSSRSISKPFWFPPLWALHMTCVT 97

Query: 50  SAFMMGLSAWLVWAEG 3
           S+F+MGLSAWLVWAEG
Sbjct: 98  SSFLMGLSAWLVWAEG 113


>ref|XP_002321017.1| predicted protein [Populus trichocarpa] gi|222861790|gb|EEE99332.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/75 (58%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
 Frame = -2

Query: 215 SMPRRGIWSLGVGIAVPLALTLANISLFGWNRSYQTS----HKPFWVPPLWSLHLTCLTS 48
           +M +RGI SL + +A+PL+LT++N+  FG  R Y TS      PFW PP W+LHLTC+TS
Sbjct: 41  AMAKRGIRSLAIAVALPLSLTISNLYFFGTTRGYGTSTGSISMPFWFPPPWALHLTCMTS 100

Query: 47  AFMMGLSAWLVWAEG 3
           +F+MGLSAWLVWAEG
Sbjct: 101 SFLMGLSAWLVWAEG 115


>ref|XP_002531881.1| peripheral-type benzodiazepine receptor, putative [Ricinus
           communis] gi|223528489|gb|EEF30518.1| peripheral-type
           benzodiazepine receptor, putative [Ricinus communis]
          Length = 190

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
 Frame = -2

Query: 215 SMPRRGIWSLGVGIAVPLALTLANISLFGWNRSY-QTSHKPFWVPPLWSLHLTCLTSAFM 39
           +M +RGI SL + +A PL+LTL NI  FG    Y   S KPFW PP+W+LH TCL S+F+
Sbjct: 35  AMAKRGIRSLAIAVAFPLSLTLFNIYFFGSRNGYGPLSTKPFWFPPMWALHFTCLASSFL 94

Query: 38  MGLSAWLVWAEG 3
           MGLSAWLVWAEG
Sbjct: 95  MGLSAWLVWAEG 106


>gb|AFH57280.1| putative peripheral-type benzodiazepine receptor [Gossypium
           hirsutum]
          Length = 189

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 41/71 (57%), Positives = 51/71 (71%)
 Frame = -2

Query: 215 SMPRRGIWSLGVGIAVPLALTLANISLFGWNRSYQTSHKPFWVPPLWSLHLTCLTSAFMM 36
           +M +RG+ SL + ++ PL+LTL NI LFG  R Y +  KPFW PPLW LH  CL S+F+M
Sbjct: 35  AMAKRGLRSLVIAVSFPLSLTLLNIYLFGSGRGYASLAKPFWFPPLWLLHTGCLASSFLM 94

Query: 35  GLSAWLVWAEG 3
           GLSAW VW EG
Sbjct: 95  GLSAWFVWVEG 105


>emb|CAH10765.1| peripheral-type benzodiazepine receptor [Solanum tuberosum]
          Length = 192

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 40/68 (58%), Positives = 51/68 (75%)
 Frame = -2

Query: 206 RRGIWSLGVGIAVPLALTLANISLFGWNRSYQTSHKPFWVPPLWSLHLTCLTSAFMMGLS 27
           +RG+ SL + + +PL LTL +ISLFG +  Y +  KPFW P LW+LHL CL S+ +MGLS
Sbjct: 52  KRGLKSLTIALTIPLLLTLIDISLFGSSYQYVSMEKPFWFPRLWALHLACLGSSLLMGLS 111

Query: 26  AWLVWAEG 3
           AWLVWAEG
Sbjct: 112 AWLVWAEG 119


Top