BLASTX nr result

ID: Atractylodes21_contig00054314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054314
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    98   6e-19
gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                    91   1e-16
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...    78   7e-13
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]            78   7e-13
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...    77   1e-12

>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101216349 [Cucumis sativus]
          Length = 1830

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/79 (60%), Positives = 65/79 (82%), Gaps = 4/79 (5%)
 Frame = +2

Query: 2   YYNRVIILLNQMSLNGESIEDRRVVEKILRSLTRKFEYIVVAIEESKDLSDFSLE----T 169
           ++NRV++++NQ+  NGE+IED+R+VEKILRS+TR++E+IVVAIEESKDLS  S+     +
Sbjct: 134 FFNRVLLIVNQLRSNGETIEDQRIVEKILRSMTRRYEHIVVAIEESKDLSTLSINSLMGS 193

Query: 170 LQSHELRMKQFDSPAMEHA 226
           LQSHELR+K FDS   E A
Sbjct: 194 LQSHELRLKMFDSTPSEEA 212


>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 47/87 (54%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
 Frame = +2

Query: 2   YYNRVIILLNQMSLNGESIEDRRVVEKILRSLTRKFEYIVVAIEESKDLSDFSLE----T 169
           ++N +++++N +  NGE + D+RVVEKILRS+ RKFE+IVVAIEESKDLS  S+     +
Sbjct: 136 FFNHILVIVNSLRSNGEEVGDQRVVEKILRSMPRKFEHIVVAIEESKDLSTLSINSLMGS 195

Query: 170 LQSHELRMKQFD-SPAMEHASNTVFMG 247
           LQSHELR+KQFD +P       T F G
Sbjct: 196 LQSHELRLKQFDVNPEEAFQMQTSFRG 222


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1142

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/79 (53%), Positives = 58/79 (73%), Gaps = 4/79 (5%)
 Frame = +2

Query: 2   YYNRVIILLNQMSLNGESIEDRRVVEKILRSLTRKFEYIVVAIEESKDLSDFSLE----T 169
           Y++RVI ++NQM L GE I D++VVEKIL SL  K+EYIV AIEESKDLS  +++    +
Sbjct: 130 YFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTLTIQQLMSS 189

Query: 170 LQSHELRMKQFDSPAMEHA 226
           L+SHE R  Q +  ++E+A
Sbjct: 190 LESHEERKLQREGSSIENA 208


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/79 (53%), Positives = 58/79 (73%), Gaps = 4/79 (5%)
 Frame = +2

Query: 2   YYNRVIILLNQMSLNGESIEDRRVVEKILRSLTRKFEYIVVAIEESKDLSDFSLE----T 169
           Y++RVI ++NQM L GE I D++VVEKIL SL  K+EYIV AIEESKDLS  +++    +
Sbjct: 130 YFSRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTLTIQQLMSS 189

Query: 170 LQSHELRMKQFDSPAMEHA 226
           L+SHE R  Q +  ++E+A
Sbjct: 190 LESHEERKLQREGSSIENA 208


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
           gi|31429795|gb|AAP51797.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1350

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/79 (53%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
 Frame = +2

Query: 2   YYNRVIILLNQMSLNGESIEDRRVVEKILRSLTRKFEYIVVAIEESKDLSDFSLE----T 169
           Y+ RVI ++NQM L GE I D++VVEKIL SL  K+EYIV AIEESKDLS  +++    +
Sbjct: 130 YFPRVIEIVNQMRLYGEDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTLTIQQLMSS 189

Query: 170 LQSHELRMKQFDSPAMEHA 226
           L+SHE R  Q +  ++E+A
Sbjct: 190 LESHEERKLQREGSSIENA 208


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