BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054299
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521663.1| pentatricopeptide repeat-containing protein,...   117   8e-25
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-21
ref|XP_002867315.1| pentatricopeptide repeat-containing protein ...   101   7e-20
sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-c...   101   7e-20
ref|NP_194836.1| pentatricopeptide repeat-containing protein [Ar...   101   7e-20

>ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539054|gb|EEF40650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 578

 Score =  117 bits (294), Expect = 8e-25
 Identities = 55/97 (56%), Positives = 74/97 (76%)
 Frame = +3

Query: 3   MFKEMYECGFVAKPELLASILSVCVRCGYTRVGKMIHALSVVDERFEKLVFLSTALVDLY 182
           MFKEMYECG V KPEL+AS++SVCVR G  ++G+ IHAL ++D R  K +F+ T+LVD Y
Sbjct: 114 MFKEMYECGIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWY 173

Query: 183 WRSGDSVMAFRVFDAMADKNEVSWTSMIVGYVGSCDY 293
           ++SGDS+MA RVFD +  KN VSWT+++ G   + DY
Sbjct: 174 FKSGDSLMALRVFDQIEVKNVVSWTALVSGCSANLDY 210


>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/94 (56%), Positives = 69/94 (73%)
 Frame = +3

Query: 12  EMYECGFVAKPELLASILSVCVRCGYTRVGKMIHALSVVDERFEKLVFLSTALVDLYWRS 191
           ++Y  G V KPELLAS++S+C R   +++G+ IHAL VV+ER  + +FLSTALVD Y+R 
Sbjct: 142 DVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRC 201

Query: 192 GDSVMAFRVFDAMADKNEVSWTSMIVGYVGSCDY 293
           GDS+MA RVFD M  KN VSWT+MI G +   DY
Sbjct: 202 GDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDY 235


>ref|XP_002867315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313151|gb|EFH43574.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/98 (53%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   MFKEMYECGFVAKPELLASILSVCVRCGYT-RVGKMIHALSVVDERFEKLVFLSTALVDL 179
           + KEMY  GFV K EL+AS+L++C R G + +V +M+HAL +VDER ++ V LSTAL+D+
Sbjct: 135 LLKEMYFYGFVPKSELVASLLALCTRMGSSSKVARMLHALVLVDERIQESVLLSTALLDM 194

Query: 180 YWRSGDSVMAFRVFDAMADKNEVSWTSMIVGYVGSCDY 293
           Y +  D   AF VFD M  KNEVSWT+MI G V + +Y
Sbjct: 195 YLKFDDPAAAFHVFDQMELKNEVSWTAMISGCVANYNY 232


>sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31070, mitochondrial; Flags: Precursor
          Length = 624

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   MFKEMYECGFVAKPELLASILSVCVRCGYT-RVGKMIHALSVVDERFEKLVFLSTALVDL 179
           + KEMY  GF+ K EL+AS+L++C R G + +V +M HAL +VDER ++ V LSTALVD+
Sbjct: 146 LIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDM 205

Query: 180 YWRSGDSVMAFRVFDAMADKNEVSWTSMIVGYVGSCDY 293
           Y +  D   AF VFD M  KNEVSWT+MI G V + +Y
Sbjct: 206 YLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNY 243


>ref|NP_194836.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|2980759|emb|CAA18186.1| putative protein [Arabidopsis
           thaliana] gi|7270009|emb|CAB79825.1| putative protein
           [Arabidopsis thaliana] gi|332660453|gb|AEE85853.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 613

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   MFKEMYECGFVAKPELLASILSVCVRCGYT-RVGKMIHALSVVDERFEKLVFLSTALVDL 179
           + KEMY  GF+ K EL+AS+L++C R G + +V +M HAL +VDER ++ V LSTALVD+
Sbjct: 135 LIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDM 194

Query: 180 YWRSGDSVMAFRVFDAMADKNEVSWTSMIVGYVGSCDY 293
           Y +  D   AF VFD M  KNEVSWT+MI G V + +Y
Sbjct: 195 YLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNY 232