BLASTX nr result

ID: Atractylodes21_contig00054279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054279
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...    67   2e-09
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    65   8e-09
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    65   8e-09
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]    63   2e-08
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]    63   2e-08

>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = +2

Query: 17   KFEIRGRPGVFMGYPSGTKGYKIYDPSHDKIIVSRDVKFAENMFPFATKIKEVEHEEEDV 196
            KFE R R   F+GYPSG KGYK+ D     I +SR+V F E++FPF  K K  E+EE  V
Sbjct: 772  KFEDRARTCAFLGYPSGYKGYKLLDLESHTIFISRNVVFYEDLFPF--KTKPAENEESSV 829

Query: 197  FL-YPFVEKQGLEENEPNRLNETN 265
            F  + +V++     ++P  + ET+
Sbjct: 830  FFPHIYVDRNDSHPSQPLPVQETS 853


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
 Frame = +2

Query: 14   DKFEIRGRPGVFMGYPSGTKGYKIYDPSHDKIIVSRDVKFAENMFPFATKIKEVEHE--- 184
            DKF  R R  +F+GYP G KG+K+YD S ++ IVSRDV F EN+FP+AT   +  +    
Sbjct: 749  DKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFRENVFPYATNEGDTIYTPPV 808

Query: 185  ------EEDVFLYPFVEKQGLEEN 238
                  +ED   +  +E +G +EN
Sbjct: 809  TCPITYDEDWLPFTTLEDRGSDEN 832


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
 Frame = +2

Query: 14   DKFEIRGRPGVFMGYPSGTKGYKIYDPSHDKIIVSRDVKFAENMFPFATKIKEVEHE--- 184
            DKF  R R  +F+GYP G KG+K+YD S ++ IVSRDV F EN+FP+AT   +  +    
Sbjct: 749  DKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFRENVFPYATNEGDTIYTPPV 808

Query: 185  ------EEDVFLYPFVEKQGLEEN 238
                  +ED   +  +E +G +EN
Sbjct: 809  TCPITYDEDWLPFTTLEDRGSDEN 832


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +2

Query: 2   ETKGDKFEIRGRPGVFMGYPSGTKGYKIYDPSHDKIIVSRDVKFAENMFPF 154
           ++KGDKF  R R  VF+GYP G KG+K++D    ++ VSRDVKF E++FPF
Sbjct: 414 KSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPF 464


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +2

Query: 2   ETKGDKFEIRGRPGVFMGYPSGTKGYKIYDPSHDKIIVSRDVKFAENMFPF 154
           ++KGDKF  R R  VF+GYP G KG+K++D    ++ VSRDVKF E++FPF
Sbjct: 747 KSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPF 797


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