BLASTX nr result

ID: Atractylodes21_contig00054262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054262
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531146.1| nucleic acid binding protein, putative [Rici...    80   1e-13
ref|XP_004146205.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...    78   9e-13
ref|XP_003612231.1| RING finger protein [Medicago truncatula] gi...    70   1e-10
ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycin...    70   2e-10
ref|XP_003517159.1| PREDICTED: RING-H2 finger protein ATL44-like...    69   3e-10

>ref|XP_002531146.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529259|gb|EEF31231.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 137

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 34/56 (60%), Positives = 41/56 (73%)
 Frame = +1

Query: 91  EGESCCVCLLRLDKARDDERRVLACGHEFHKACVDKWFDVCRKTCPVCRFSVEVEE 258
           EGE CCVCL RL     +  RVL C H FH+ C+D+WF+VCRKTCPVCRF++  EE
Sbjct: 59  EGEFCCVCLSRLKGG--ENMRVLPCMHRFHRVCIDRWFNVCRKTCPVCRFAMGQEE 112


>ref|XP_004146205.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Cucumis
           sativus]
          Length = 144

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
 Frame = +1

Query: 70  TNYETGLEGESCCVCLLRLDKA-RDDER----RVLACGHEFHKACVDKWFDVCRKTCPVC 234
           ++ E  LEGE+CCVCL  +    RD ++     VL C HEFHK CV++WF+ CR+TCP+C
Sbjct: 51  SSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPIC 110

Query: 235 RFSVE 249
           R+S+E
Sbjct: 111 RYSME 115


>ref|XP_003612231.1| RING finger protein [Medicago truncatula]
           gi|355513566|gb|AES95189.1| RING finger protein
           [Medicago truncatula]
          Length = 142

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/52 (61%), Positives = 35/52 (67%)
 Frame = +1

Query: 103 CCVCLLRLDKARDDERRVLACGHEFHKACVDKWFDVCRKTCPVCRFSVEVEE 258
           CCVCL  L+    DE RVL C HEFHK CVD W     KTCP+CRFS+ VEE
Sbjct: 57  CCVCLSMLNNK--DEIRVLPCSHEFHKVCVDSWLKGHHKTCPLCRFSMGVEE 106


>ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycine max]
           gi|255632902|gb|ACU16805.1| unknown [Glycine max]
          Length = 101

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/56 (60%), Positives = 39/56 (69%)
 Frame = +1

Query: 91  EGESCCVCLLRLDKARDDERRVLACGHEFHKACVDKWFDVCRKTCPVCRFSVEVEE 258
           E   CCVCL RL KA+D E RVL C H+FHK CV+KW     KTCP+CRFS+  EE
Sbjct: 24  EDSWCCVCLSRL-KAKD-EIRVLPCSHKFHKICVNKWLKGRHKTCPLCRFSMGAEE 77


>ref|XP_003517159.1| PREDICTED: RING-H2 finger protein ATL44-like [Glycine max]
          Length = 133

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/56 (58%), Positives = 40/56 (71%)
 Frame = +1

Query: 91  EGESCCVCLLRLDKARDDERRVLACGHEFHKACVDKWFDVCRKTCPVCRFSVEVEE 258
           E   CCVCL RL KA+D E RVL C H+FHK+CV++W     KTCP+CRFS+  EE
Sbjct: 56  EDSWCCVCLSRL-KAKD-EIRVLPCSHKFHKSCVNRWLKGRHKTCPLCRFSMGAEE 109


Top