BLASTX nr result

ID: Atractylodes21_contig00054197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054197
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31326.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]   142   3e-32
ref|XP_002528030.1| pentatricopeptide repeat-containing protein,...   139   3e-31
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30

>emb|CBI31326.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  142 bits (358), Expect = 3e-32
 Identities = 71/95 (74%), Positives = 83/95 (87%)
 Frame = -3

Query: 290 GKTKLAHRVFEDIGDDQRDVVLWGAMIAGFAHNRLQMEALEYLRSMQKDGICPNSVILTT 111
           GK KLA  +FE+I +  RDVV+WGAMIAGF HNRLQ EALEYLR M+++GICPNSVI+TT
Sbjct: 93  GKIKLARLMFEEIVE--RDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTT 150

Query: 110 ILPVIGEVSSRKLGQEVHAYVIKTKEYSKQLFIQS 6
           ILPVIGEV + KLG+EVHAYV+KTK YSKQ+FIQS
Sbjct: 151 ILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQS 185


>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Vitis vinifera]
          Length = 725

 Score =  142 bits (358), Expect = 3e-32
 Identities = 71/95 (74%), Positives = 83/95 (87%)
 Frame = -3

Query: 290 GKTKLAHRVFEDIGDDQRDVVLWGAMIAGFAHNRLQMEALEYLRSMQKDGICPNSVILTT 111
           GK KLA  +FE+I +  RDVV+WGAMIAGF HNRLQ EALEYLR M+++GICPNSVI+TT
Sbjct: 303 GKIKLARLMFEEIVE--RDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTT 360

Query: 110 ILPVIGEVSSRKLGQEVHAYVIKTKEYSKQLFIQS 6
           ILPVIGEV + KLG+EVHAYV+KTK YSKQ+FIQS
Sbjct: 361 ILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQS 395



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/95 (33%), Positives = 52/95 (54%)
 Frame = -3

Query: 290 GKTKLAHRVFEDIGDDQRDVVLWGAMIAGFAHNRLQMEALEYLRSMQKDGICPNSVILTT 111
           G    + ++F+  G D R+V+ W AMI  +  N    EA+   RSMQ     P+SV +  
Sbjct: 506 GNLDYSFKLFD--GMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMAR 563

Query: 110 ILPVIGEVSSRKLGQEVHAYVIKTKEYSKQLFIQS 6
           IL + GE+   KLG+E+H  ++K K++    F+ +
Sbjct: 564 ILSICGELRVLKLGKEIHGQILK-KDFESIPFVSA 597


>emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]
          Length = 664

 Score =  142 bits (358), Expect = 3e-32
 Identities = 71/95 (74%), Positives = 83/95 (87%)
 Frame = -3

Query: 290 GKTKLAHRVFEDIGDDQRDVVLWGAMIAGFAHNRLQMEALEYLRSMQKDGICPNSVILTT 111
           GK KLA  +FE+I +  RDVV+WGAMIAGF HNRLQ EALEYLR M+++GICPNSVI+TT
Sbjct: 242 GKIKLARLMFEEIVE--RDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTT 299

Query: 110 ILPVIGEVSSRKLGQEVHAYVIKTKEYSKQLFIQS 6
           ILPVIGEV + KLG+EVHAYV+KTK YSKQ+FIQS
Sbjct: 300 ILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQS 334



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/95 (33%), Positives = 52/95 (54%)
 Frame = -3

Query: 290 GKTKLAHRVFEDIGDDQRDVVLWGAMIAGFAHNRLQMEALEYLRSMQKDGICPNSVILTT 111
           G    + ++F+  G D R+V+ W AMI  +  N    EA+   RSMQ     P+SV +  
Sbjct: 445 GNLDYSFKLFD--GMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMAR 502

Query: 110 ILPVIGEVSSRKLGQEVHAYVIKTKEYSKQLFIQS 6
           IL + GE+   KLG+E+H  ++K K++    F+ +
Sbjct: 503 ILSICGELRVLKLGKEIHGQILK-KDFESIPFVSA 536


>ref|XP_002528030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532560|gb|EEF34348.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/96 (70%), Positives = 79/96 (82%)
 Frame = -3

Query: 290 GKTKLAHRVFEDIGDDQRDVVLWGAMIAGFAHNRLQMEALEYLRSMQKDGICPNSVILTT 111
           GK KLAHRVFE++ D   D+V+WGAMIAGFAHNR Q EAL+YLR M  +G+ PNSVI+TT
Sbjct: 268 GKIKLAHRVFEEMPDRGIDIVVWGAMIAGFAHNRYQREALDYLRWMVSEGLYPNSVIVTT 327

Query: 110 ILPVIGEVSSRKLGQEVHAYVIKTKEYSKQLFIQSG 3
           ILPVIGE  +RKLGQEVH YV+KTK YS QL IQ+G
Sbjct: 328 ILPVIGEAWARKLGQEVHGYVVKTKRYSNQLTIQTG 363


>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 716

 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/95 (73%), Positives = 81/95 (85%)
 Frame = -3

Query: 290 GKTKLAHRVFEDIGDDQRDVVLWGAMIAGFAHNRLQMEALEYLRSMQKDGICPNSVILTT 111
           GK KLA ++F +I   +RDVV+WG++IAGFAHNRLQ EALEY R M  DGI PNSVILTT
Sbjct: 266 GKIKLARQMFGEI--TERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTT 323

Query: 110 ILPVIGEVSSRKLGQEVHAYVIKTKEYSKQLFIQS 6
           ILPVIGE+ +R+LGQEVHAYVIKTK YSKQ+FIQS
Sbjct: 324 ILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQS 358



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/72 (37%), Positives = 44/72 (61%)
 Frame = -3

Query: 251 GDDQRDVVLWGAMIAGFAHNRLQMEALEYLRSMQKDGICPNSVILTTILPVIGEVSSRKL 72
           G +QR+V+LW AMI  +  N+   EA++  R+MQ     P++V ++ IL +  E    K+
Sbjct: 480 GMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKM 539

Query: 71  GQEVHAYVIKTK 36
           G+E+H  V+K K
Sbjct: 540 GKEIHGQVLKRK 551


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