BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054169
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   140   8e-32
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   140   1e-31
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   139   2e-31
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     139   2e-31
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   139   2e-31

>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/93 (75%), Positives = 78/93 (83%)
 Frame = -2

Query: 280  KAQCPSTKEEMDRMKGVPYASGIGSIMYAMICTRPDVSYALSMTSRYQANPGEAHLVAVK 101
            K+Q PST +E DRM G+PYAS IGSIMYAMICTR DVSYALS+TSRYQA+PGE H  AVK
Sbjct: 1072 KSQRPSTTDERDRMNGIPYASAIGSIMYAMICTRQDVSYALSVTSRYQADPGECHWTAVK 1131

Query: 100  NILKYLRRTKDMFLLYGGVVGDLCIRGYTDASF 2
            NILKYLRRTKD FL+YGG   +L + GYTDASF
Sbjct: 1132 NILKYLRRTKDAFLIYGG-DEELVVNGYTDASF 1163


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/93 (73%), Positives = 78/93 (83%)
 Frame = -2

Query: 280 KAQCPSTKEEMDRMKGVPYASGIGSIMYAMICTRPDVSYALSMTSRYQANPGEAHLVAVK 101
           K QCP+T +E D+M  +PYAS IGSIMYAMICTRPDVSYALS+TSRYQA+P E H  AVK
Sbjct: 656 KNQCPTTTDERDKMSDIPYASAIGSIMYAMICTRPDVSYALSVTSRYQADPSEGHWTAVK 715

Query: 100 NILKYLRRTKDMFLLYGGVVGDLCIRGYTDASF 2
           NILKYLRRTKD+FL+YGG   +L + GYTDASF
Sbjct: 716 NILKYLRRTKDVFLVYGG-DEELVVNGYTDASF 747


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/93 (72%), Positives = 78/93 (83%)
 Frame = -2

Query: 280  KAQCPSTKEEMDRMKGVPYASGIGSIMYAMICTRPDVSYALSMTSRYQANPGEAHLVAVK 101
            K QCP T +E ++M  +PYAS IGSIMYAM+CTRPDVSYALS TSRYQ++PGE+H +AVK
Sbjct: 947  KNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGESHWIAVK 1006

Query: 100  NILKYLRRTKDMFLLYGGVVGDLCIRGYTDASF 2
            NILKYLRRTKDMFL YGG   +L + GYTDASF
Sbjct: 1007 NILKYLRRTKDMFLAYGG-QEELVVNGYTDASF 1038


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/93 (74%), Positives = 77/93 (82%)
 Frame = -2

Query: 280  KAQCPSTKEEMDRMKGVPYASGIGSIMYAMICTRPDVSYALSMTSRYQANPGEAHLVAVK 101
            K QCP T +E ++M  VPYAS IGSIMYAM+CTRPDVSYALS TSRYQ++PGE H  AVK
Sbjct: 1076 KNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVK 1135

Query: 100  NILKYLRRTKDMFLLYGGVVGDLCIRGYTDASF 2
            NILKYLRRTKDMFL+YGG   DL + GYTDASF
Sbjct: 1136 NILKYLRRTKDMFLVYGG-EEDLVVSGYTDASF 1167


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/93 (70%), Positives = 79/93 (84%)
 Frame = -2

Query: 280  KAQCPSTKEEMDRMKGVPYASGIGSIMYAMICTRPDVSYALSMTSRYQANPGEAHLVAVK 101
            K QCP T +E ++M  +PYAS IGSIMYAM+CT PDVSYALS TSRYQ++PGE+H +AVK
Sbjct: 810  KNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTHPDVSYALSATSRYQSDPGESHWIAVK 869

Query: 100  NILKYLRRTKDMFLLYGGVVGDLCIRGYTDASF 2
            NILKYLRRTKDMFL+YGG   +L ++GYTDASF
Sbjct: 870  NILKYLRRTKDMFLVYGG-QEELVVKGYTDASF 901