BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053854
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    71   1e-25
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    65   6e-21
gb|ABD78322.1| polyprotein [Primula vulgaris]                          64   2e-18
emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]    58   4e-17
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...    60   6e-17

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 70.9 bits (172), Expect(3) = 1e-25
 Identities = 36/53 (67%), Positives = 39/53 (73%)
 Frame = +1

Query: 130 EGSNPVSVRPYRYPQFQKNEIEKLIGEMLGAGIIXXXXXXXXXXVLLVKKKMG 288
           EGSNPV VRPYRYPQFQK+EIE+LI EML AGII          V+LVKKK G
Sbjct: 687 EGSNPVGVRPYRYPQFQKDEIERLIKEMLAAGIIQPSTSPFSSPVILVKKKDG 739



 Score = 45.8 bits (107), Expect(3) = 1e-25
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +2

Query: 38  FLQQVVNDFNRVFSQPMGLPPNRDHEHAIILK 133
           FLQ+++  F  VF  P+GLPP R HEHAI+LK
Sbjct: 655 FLQELMRRFEGVFETPVGLPPRRGHEHAIVLK 686



 Score = 45.1 bits (105), Expect(3) = 1e-25
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +3

Query: 273 KKKDGSWRFCMDYRALNKE 329
           KKKDGSWRFC+DYRALNKE
Sbjct: 735 KKKDGSWRFCVDYRALNKE 753


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 65.5 bits (158), Expect(3) = 6e-21
 Identities = 34/52 (65%), Positives = 38/52 (73%)
 Frame = +1

Query: 133 GSNPVSVRPYRYPQFQKNEIEKLIGEMLGAGIIXXXXXXXXXXVLLVKKKMG 288
           G+NPVSVRPYRYPQ QK+EIE+LI +ML AGII          VLLVKKK G
Sbjct: 620 GTNPVSVRPYRYPQSQKDEIEQLIHDMLAAGIIQQSHSAFSSPVLLVKKKDG 671



 Score = 41.2 bits (95), Expect(3) = 6e-21
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 273 KKKDGSWRFCMDYRALN 323
           KKKDGSWRFC+DYRALN
Sbjct: 667 KKKDGSWRFCVDYRALN 683



 Score = 38.9 bits (89), Expect(3) = 6e-21
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +2

Query: 29  VSGFLQQVVNDFNRVFSQPMGLPPNRDHEHAIILK 133
           V   LQ +++ + +VF+ P+GLPP+R H HAI L+
Sbjct: 584 VPSCLQPLLSSYQQVFNMPLGLPPDRGHVHAINLQ 618


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score = 63.5 bits (153), Expect(3) = 2e-18
 Identities = 29/54 (53%), Positives = 38/54 (70%)
 Frame = +1

Query: 127 IEGSNPVSVRPYRYPQFQKNEIEKLIGEMLGAGIIXXXXXXXXXXVLLVKKKMG 288
           I+G+NP+SVRPYRYP FQKNEIEK++ E++ +G I          V+LVKK  G
Sbjct: 483 IQGTNPISVRPYRYPYFQKNEIEKIVKELIESGFIRPSQSPFSSPVILVKKSDG 536



 Score = 38.9 bits (89), Expect(3) = 2e-18
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +3

Query: 273 KKKDGSWRFCMDYRALNK 326
           KK DGSWR C+DYRALNK
Sbjct: 532 KKSDGSWRMCVDYRALNK 549



 Score = 34.3 bits (77), Expect(3) = 2e-18
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 41  LQQVVNDFNRVFSQPMGLPPNRDHEHAIIL 130
           +  ++  F  VFS+P GLPP R+H H I L
Sbjct: 453 ISPLLRGFPEVFSEPKGLPPEREHVHKIEL 482


>emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]
          Length = 1259

 Score = 58.2 bits (139), Expect(3) = 4e-17
 Identities = 27/53 (50%), Positives = 37/53 (69%)
 Frame = +1

Query: 130 EGSNPVSVRPYRYPQFQKNEIEKLIGEMLGAGIIXXXXXXXXXXVLLVKKKMG 288
           EG++P++VRPYRY  FQK+EIE+ + +ML +G+I          VLLVKKK G
Sbjct: 455 EGTDPINVRPYRYAYFQKDEIERQVSDMLNSGLIRPSSSPFSSPVLLVKKKDG 507



 Score = 40.4 bits (93), Expect(3) = 4e-17
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 273 KKKDGSWRFCMDYRALN 323
           KKKDGSWRFC DYRALN
Sbjct: 503 KKKDGSWRFCTDYRALN 519



 Score = 33.9 bits (76), Expect(3) = 4e-17
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 41  LQQVVNDFNRVFSQPMGLPPNRDHEHAIILK 133
           L++++  F+ +F  P  LPP RD EH I LK
Sbjct: 424 LKELIEAFDDIFQAPSQLPPQRDIEHQITLK 454


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score = 60.1 bits (144), Expect(3) = 6e-17
 Identities = 32/53 (60%), Positives = 36/53 (67%)
 Frame = +1

Query: 130 EGSNPVSVRPYRYPQFQKNEIEKLIGEMLGAGIIXXXXXXXXXXVLLVKKKMG 288
           EGS+PV++RPYRY   QKNEIEKL+ EML A II          VLLVKKK G
Sbjct: 711 EGSSPVNIRPYRYSFAQKNEIEKLVREMLNAQIIRPSVSPYSSPVLLVKKKDG 763



 Score = 40.0 bits (92), Expect(3) = 6e-17
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 273 KKKDGSWRFCMDYRALNK 326
           KKKDG WRFC+DYRALN+
Sbjct: 759 KKKDGGWRFCVDYRALNE 776



 Score = 31.6 bits (70), Expect(3) = 6e-17
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +2

Query: 41  LQQVVNDFNRVFSQPMGLPPNRDHEHAIILK 133
           +Q++++ +  VF  P  LPP R+ EHAI L+
Sbjct: 680 IQRLLDQYQGVFQTPQLLPPVRNREHAITLQ 710