BLASTX nr result

ID: Atractylodes21_contig00053556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053556
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|1...   105   5e-21
ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 ho...   103   2e-20
ref|XP_002511315.1| thyroid hormone receptor interactor, putativ...   102   4e-20
ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 ho...   100   9e-20
ref|XP_002867651.1| hypothetical protein ARALYDRAFT_492371 [Arab...    97   2e-18

>ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|118485393|gb|ABK94553.1|
           unknown [Populus trichocarpa]
           gi|222858748|gb|EEE96295.1| predicted protein [Populus
           trichocarpa]
          Length = 465

 Score =  105 bits (261), Expect = 5e-21
 Identities = 56/92 (60%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
 Frame = +2

Query: 29  PMEISLQN-VTNGDTPHDQTGTVPEPGLASSPAPAVAEDKFLVSVEVCLKPSSTARIEDV 205
           PM+I++QN +      HD +        +SSP+P +   KFLVSVEVCLKPSSTAR+EDV
Sbjct: 7   PMDITIQNPIETTAISHDLSDGNGVALPSSSPSPILTHRKFLVSVEVCLKPSSTARVEDV 66

Query: 206 KLAVERMLEKRSLSYVDGPIDMPLNDTFLVEN 301
           +LAVERMLEKRSLSYVDGPI +P +D FL EN
Sbjct: 67  RLAVERMLEKRSLSYVDGPIPVPFDDQFLFEN 98


>ref|XP_004152492.1| PREDICTED: pachytene checkpoint protein 2 homolog [Cucumis sativus]
           gi|449487740|ref|XP_004157777.1| PREDICTED: pachytene
           checkpoint protein 2 homolog [Cucumis sativus]
          Length = 456

 Score =  103 bits (256), Expect = 2e-20
 Identities = 59/94 (62%), Positives = 65/94 (69%)
 Frame = +2

Query: 20  MSVPMEISLQNVTNGDTPHDQTGTVPEPGLASSPAPAVAEDKFLVSVEVCLKPSSTARIE 199
           MS PMEIS  N        +  G   E    S+ +  V EDK LVSVEVCLK SSTARIE
Sbjct: 1   MSAPMEISFPNPPLEAQMSESNGISSE----SAASSIVNEDKILVSVEVCLKSSSTARIE 56

Query: 200 DVKLAVERMLEKRSLSYVDGPIDMPLNDTFLVEN 301
           DV+LAVERMLEKRSLSYVDGPI +PL+D FL EN
Sbjct: 57  DVRLAVERMLEKRSLSYVDGPIPVPLDDAFLTEN 90


>ref|XP_002511315.1| thyroid hormone receptor interactor, putative [Ricinus communis]
           gi|223550430|gb|EEF51917.1| thyroid hormone receptor
           interactor, putative [Ricinus communis]
          Length = 460

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/91 (59%), Positives = 66/91 (72%)
 Frame = +2

Query: 29  PMEISLQNVTNGDTPHDQTGTVPEPGLASSPAPAVAEDKFLVSVEVCLKPSSTARIEDVK 208
           PMEIS  N +      DQ G      L  SP+P +  DK+LVSVEVCLKPSSTAR+ED++
Sbjct: 7   PMEISTLNPSTELHISDQNGAAQ---LQPSPSPILHHDKYLVSVEVCLKPSSTARVEDIQ 63

Query: 209 LAVERMLEKRSLSYVDGPIDMPLNDTFLVEN 301
            AVERMLEKRSLSYVDGPI +P++D +L +N
Sbjct: 64  SAVERMLEKRSLSYVDGPIPVPVDDPYLSDN 94


>ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 homolog [Vitis vinifera]
           gi|297733699|emb|CBI14946.3| unnamed protein product
           [Vitis vinifera]
          Length = 455

 Score =  100 bits (250), Expect = 9e-20
 Identities = 57/94 (60%), Positives = 67/94 (71%)
 Frame = +2

Query: 20  MSVPMEISLQNVTNGDTPHDQTGTVPEPGLASSPAPAVAEDKFLVSVEVCLKPSSTARIE 199
           MS PMEISLQN T GD+  DQ G        S P+P + ++K LVSVEVCLK SSTAR +
Sbjct: 1   MSEPMEISLQNATVGDSS-DQNGVSE-----SIPSPILTQEKVLVSVEVCLKASSTARSD 54

Query: 200 DVKLAVERMLEKRSLSYVDGPIDMPLNDTFLVEN 301
           DV+ AVERMLE RSLSY DG + + L+D FLVEN
Sbjct: 55  DVRSAVERMLENRSLSYTDGSVPVSLDDPFLVEN 88


>ref|XP_002867651.1| hypothetical protein ARALYDRAFT_492371 [Arabidopsis lyrata subsp.
           lyrata] gi|297313487|gb|EFH43910.1| hypothetical protein
           ARALYDRAFT_492371 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/90 (57%), Positives = 64/90 (71%)
 Frame = +2

Query: 32  MEISLQNVTNGDTPHDQTGTVPEPGLASSPAPAVAEDKFLVSVEVCLKPSSTARIEDVKL 211
           ME+S QN     T  +Q   V EP    +P P + E+KFLVSVEVCLKPSSTAR+EDV+ 
Sbjct: 23  MEVSHQNPIEATTIPEQIA-VAEPVATPNPPPCLHENKFLVSVEVCLKPSSTARLEDVQR 81

Query: 212 AVERMLEKRSLSYVDGPIDMPLNDTFLVEN 301
           AVERMLE RS+SY DG + +P +D FLV+N
Sbjct: 82  AVERMLETRSMSYADGLVLIPADDLFLVDN 111


Top