BLASTX nr result

ID: Atractylodes21_contig00053285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053285
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28472.1| polyprotein [Ananas comosus]                            94   1e-17
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      83   3e-14
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...    80   1e-13
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    79   3e-13
emb|CAJ00274.1| hypothetical protein [Lotus japonicus]                 75   4e-12

>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/125 (35%), Positives = 73/125 (58%)
 Frame = +3

Query: 6   MTVRVANGGKVTCDTVIEGFQWKMQSITFTADLYLIPLGGCDVVLGIQWFTSLGKVHFDF 185
           + V VA+G K+   +    F+WKMQ + F A+L L+PL GCD+VLG+QW   LG + +DF
Sbjct: 54  VNVTVADGNKLISSSTCRAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWDF 113

Query: 186 LNHMIELLVKGSKVTLRGATSKGIKVVSKSKMGRMLQQTGQLSMMQLLAVHPDNPLPNFH 365
               +E   +G K+ LRG++   +K++   ++ +M+     LS + L ++H   P    H
Sbjct: 114 SKLRMEFQFQGQKIVLRGSSGPSLKIIEGKQLKKMVLDDTALSAVHLCSIHA-TPQEGNH 172

Query: 366 IHTNQ 380
           I T++
Sbjct: 173 IATSE 177


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/107 (37%), Positives = 62/107 (57%)
 Frame = +3

Query: 6   MTVRVANGGKVTCDTVIEGFQWKMQSITFTADLYLIPLGGCDVVLGIQWFTSLGKVHFDF 185
           MTV  A GGK       + F W+MQ  +FT ++  +PL   D+VLG+QW  +LG + +DF
Sbjct: 515 MTVDAALGGKTVTLFRSKDFTWRMQGYSFTTEVRTLPLDHWDIVLGVQWLATLGPILWDF 574

Query: 186 LNHMIELLVKGSKVTLRGATSKGIKVVSKSKMGRMLQQTGQLSMMQL 326
               +E  + G+K  LRG    G KV+  +K+ ++L Q  Q++ +QL
Sbjct: 575 TYLRMEFTLNGAKYILRGTAKAGCKVIKGNKLNKILSQEPQVAFLQL 621


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/111 (36%), Positives = 65/111 (58%)
 Frame = +3

Query: 12  VRVANGGKVTCDTVIEGFQWKMQSITFTADLYLIPLGGCDVVLGIQWFTSLGKVHFDFLN 191
           V VA+G K+  D  I+GF WK+QS TF +D+ LIPL G D+VLG+QW  +LG++ ++F  
Sbjct: 413 VAVADGRKLNVDGQIKGFTWKLQSTTFQSDILLIPLQGVDMVLGVQWLETLGRISWEFKK 472

Query: 192 HMIELLVKGSKVTLRGATSKGIKVVSKSKMGRMLQQTGQLSMMQLLAVHPD 344
             ++   K  +V L G  +  ++ +   K+ +      QL+M+ +  V  D
Sbjct: 473 LEMQFFYKNQRVWLHGIITGSVRDIKAHKLQKTQADQIQLAMVCVREVVSD 523


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
           thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/103 (35%), Positives = 61/103 (59%)
 Frame = +3

Query: 12  VRVANGGKVTCDTVIEGFQWKMQSITFTADLYLIPLGGCDVVLGIQWFTSLGKVHFDFLN 191
           V VA+G K+  +  +  F WK+Q+ TF +D+ LIPL G D+VLG+QW  +LG++ ++F  
Sbjct: 434 VSVADGRKLRVEGKVTDFSWKLQTTTFQSDILLIPLQGIDMVLGVQWLETLGRISWEFKK 493

Query: 192 HMIELLVKGSKVTLRGATSKGIKVVSKSKMGRMLQQTGQLSMM 320
             +       KV L G TS  ++ V   K+ ++ +   QL+M+
Sbjct: 494 LEMRFKFNNQKVLLHGLTSGSVREVKAQKLQKLQEDQVQLAML 536


>emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/106 (35%), Positives = 59/106 (55%)
 Frame = +3

Query: 12  VRVANGGKVTCDTVIEGFQWKMQSITFTADLYLIPLGGCDVVLGIQWFTSLGKVHFDFLN 191
           + VA+GG +      EG  WKMQ  TFT +   IPL  CD++LG+QW    GK+ +DF N
Sbjct: 422 ITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDFTN 481

Query: 192 HMIELLVKGSKVTLRGATSKGIKVVSKSKMGRMLQQTGQLSMMQLL 329
            ++E  V    V L+    K  K+V+ +K+  M+ +     ++Q+L
Sbjct: 482 LIMEFAVGTEMVRLQAMEEKENKLVTAAKLHHMVGEDKFSFLLQIL 527


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