BLASTX nr result

ID: Atractylodes21_contig00053283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053283
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF94034.1| retrotransposon protein, putative, unclassified [...   130   1e-28
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   130   1e-28
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   130   1e-28
gb|ABB47537.2| retrotransposon protein, putative, unclassified [...   127   1e-27
gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Ja...   127   1e-27

>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1409

 Score =  130 bits (327), Expect = 1e-28
 Identities = 56/86 (65%), Positives = 70/86 (81%)
 Frame = -1

Query: 260 PRLKHPNQVCEGCMVAKQTRHPFPKEAEYRATKPLELVHADLCGPISPQTSGGNRYFFLI 81
           P + HPNQ+C+ C+VAKQ R PFP  A +RA +PLEL+H DLCGPI+P T  GNRYFFLI
Sbjct: 498 PAIVHPNQLCQSCLVAKQARAPFPAAAHFRAEEPLELLHIDLCGPITPNTMSGNRYFFLI 557

Query: 80  VDDYSRFMWVYVIKTKDEAFLAFKKF 3
           VDDYSR++WV+V+KTKD++  AF KF
Sbjct: 558 VDDYSRWIWVFVLKTKDQSLDAFVKF 583


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
           gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
           Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  130 bits (326), Expect = 1e-28
 Identities = 56/86 (65%), Positives = 69/86 (80%)
 Frame = -1

Query: 260 PRLKHPNQVCEGCMVAKQTRHPFPKEAEYRATKPLELVHADLCGPISPQTSGGNRYFFLI 81
           P + HPNQ+C+ C+VAKQ R PFP  A +RA +PLEL+H DLCGPI+P T  GNRYF LI
Sbjct: 520 PAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLI 579

Query: 80  VDDYSRFMWVYVIKTKDEAFLAFKKF 3
           VDD+SR+MW++VIKTKD+A  AF KF
Sbjct: 580 VDDFSRWMWMFVIKTKDQALEAFTKF 605


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  130 bits (326), Expect = 1e-28
 Identities = 56/86 (65%), Positives = 69/86 (80%)
 Frame = -1

Query: 260 PRLKHPNQVCEGCMVAKQTRHPFPKEAEYRATKPLELVHADLCGPISPQTSGGNRYFFLI 81
           P + HPNQ+C+ C+VAKQ R PFP  A +RA +PLEL+H DLCGPI+P T  GNRYF LI
Sbjct: 520 PAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLI 579

Query: 80  VDDYSRFMWVYVIKTKDEAFLAFKKF 3
           VDD+SR+MW++VIKTKD+A  AF KF
Sbjct: 580 VDDFSRWMWMFVIKTKDQALEAFTKF 605


>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1172

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/86 (63%), Positives = 66/86 (76%)
 Frame = -1

Query: 260 PRLKHPNQVCEGCMVAKQTRHPFPKEAEYRATKPLELVHADLCGPISPQTSGGNRYFFLI 81
           P + HPNQ+C+ C+VAKQ R PFP  A YRA  PLEL+H DLCGPI+P T  GNRYF LI
Sbjct: 367 PTVHHPNQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFMLI 426

Query: 80  VDDYSRFMWVYVIKTKDEAFLAFKKF 3
           VDD+S +MWV+VIK KD+A   F+KF
Sbjct: 427 VDDFSNWMWVFVIKLKDQALAVFEKF 452


>gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1217

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/86 (63%), Positives = 66/86 (76%)
 Frame = -1

Query: 260 PRLKHPNQVCEGCMVAKQTRHPFPKEAEYRATKPLELVHADLCGPISPQTSGGNRYFFLI 81
           P + HPNQ+C+ C+VAKQ R PFP  A YRA  PLEL+H DLCGPI+P T  GNRYF LI
Sbjct: 511 PTVHHPNQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFMLI 570

Query: 80  VDDYSRFMWVYVIKTKDEAFLAFKKF 3
           VDD+S +MWV+VIK KD+A   F+KF
Sbjct: 571 VDDFSNWMWVFVIKLKDQALAVFEKF 596


Top