BLASTX nr result

ID: Atractylodes21_contig00053238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053238
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267447.1| PREDICTED: mitotic checkpoint protein bub3 [...    87   1e-15
ref|XP_002512132.1| initiation factor 5a, putative [Ricinus comm...    87   1e-15
ref|XP_003613950.1| Mitotic checkpoint protein bub3 [Medicago tr...    78   7e-13
ref|XP_002312269.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
gb|ABK92875.1| unknown [Populus trichocarpa]                           76   3e-12

>ref|XP_002267447.1| PREDICTED: mitotic checkpoint protein bub3 [Vitis vinifera]
           gi|296083003|emb|CBI22304.3| unnamed protein product
           [Vitis vinifera]
          Length = 327

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/88 (53%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
 Frame = -2

Query: 255 VESMSLCGFIAMVAAGLSVDMYDLRKLNCSFYSK--CVDIQIKCVRPYLD-QGFAAGSVD 85
           VESMSL  F  +V+AG SV+ YDLR L  S  ++   + +QIKC+R   + +GFA GS+D
Sbjct: 139 VESMSLSVFNLLVSAGASVNTYDLRMLERSAQAEQLLMGVQIKCLRSIPNSKGFAVGSID 198

Query: 84  GRVALKYFNPSNQNNDGYAFRCHPKAKK 1
           GRV L+  +PSN N+ GY+FRCHPK+KK
Sbjct: 199 GRVTLQIPDPSNSNDTGYSFRCHPKSKK 226


>ref|XP_002512132.1| initiation factor 5a, putative [Ricinus communis]
           gi|223549312|gb|EEF50801.1| initiation factor 5a,
           putative [Ricinus communis]
          Length = 509

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
 Frame = -2

Query: 255 VESMSLCGFIAMVAAGLSVDMYDLRKLN--CSFYSKCVDIQIKCVRPY-LDQGFAAGSVD 85
           V SMSL GF  M+A G SV++YDLR +     F     D+QIKC+  +   +G+A GSVD
Sbjct: 138 VASMSLSGFDLMLAVGKSVNVYDLRNMGKPVHFKENHTDVQIKCISSFPYRRGYAVGSVD 197

Query: 84  GRVALKYFNPSNQNNDGYAFRCHPKAK 4
           GRVAL++ +PSN +N+GY FRCHPK++
Sbjct: 198 GRVALEFLDPSN-SNEGYTFRCHPKSR 223


>ref|XP_003613950.1| Mitotic checkpoint protein bub3 [Medicago truncatula]
           gi|355515285|gb|AES96908.1| Mitotic checkpoint protein
           bub3 [Medicago truncatula]
          Length = 346

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/100 (47%), Positives = 58/100 (58%), Gaps = 16/100 (16%)
 Frame = -2

Query: 255 VESMSLCGFIAMVAAGLSVDMYDLR---KLNCSFYSKCVDIQIKCVR--PYLD------- 112
           ++SMS+ GF+  V  G SV +YDLR   K N S    C   Q++CV   PY +       
Sbjct: 145 IDSMSVSGFMVTVGIGASVHVYDLRNFDKPNLSM-EPCNGTQLRCVSSIPYAEGIQAISK 203

Query: 111 ----QGFAAGSVDGRVALKYFNPSNQNNDGYAFRCHPKAK 4
                GFA GSVDGRVAL+  N SN N+ GY FRCHPK+K
Sbjct: 204 SDFLAGFAVGSVDGRVALQVSNSSNSNDIGYTFRCHPKSK 243


>ref|XP_002312269.1| predicted protein [Populus trichocarpa] gi|222852089|gb|EEE89636.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
 Frame = -2

Query: 255 VESMSLCGFIAMVAAGLSVDMYDLRKLNCSFYSK--CVDIQIKCVRPY-LDQGFAAGSVD 85
           ++S+S+ GF  MVA G +V++YDLR    +   K   +D+ I CV      +G+A G +D
Sbjct: 141 IDSISISGFDLMVAVGAAVNIYDLRNYERAVDLKELSMDVGISCVASVPFTRGYAIGLID 200

Query: 84  GRVALKYFNPSNQNNDGYAFRCHPKAK 4
           GRVAL+  NP N N+ GYAFRCHP  K
Sbjct: 201 GRVALEISNPLNSNSTGYAFRCHPTTK 227


>gb|ABK92875.1| unknown [Populus trichocarpa]
          Length = 321

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
 Frame = -2

Query: 255 VESMSLCGFIAMVAAGLSVDMYDLRKLNCSFYSK--CVDIQIKCVRPY-LDQGFAAGSVD 85
           + S+S+ GF  MVA G +V++YDLR    +   K   +D+ I CV      +G+A G +D
Sbjct: 141 INSISISGFDLMVAVGAAVNIYDLRNYERAVDLKELSMDVGISCVASVPFTRGYAIGLID 200

Query: 84  GRVALKYFNPSNQNNDGYAFRCHPKAK 4
           GRVAL+  NP N N+ GYAFRCHP  K
Sbjct: 201 GRVALEISNPLNSNSTGYAFRCHPTTK 227


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