BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053234
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35
ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containi...   132   3e-29
emb|CBI15077.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002867972.1| pentatricopeptide repeat-containing protein ...   114   8e-24
ref|NP_193619.1| pentatricopeptide repeat-containing protein [Ar...   110   1e-22

>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/94 (74%), Positives = 81/94 (86%)
 Frame = +2

Query: 2   DMYAKCGKIDCAKQVFDGTDRRDLLTWTSLISGLSMHGLGKEAVEIFTEMLAEGIKPDNI 181
           DMYAKCG+IDCA++VFDG  +RDLLTWTS+ISGLSMHGLG E +  F+EMLAEG KPD+I
Sbjct: 333 DMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDI 392

Query: 182 TLVGVLNACSHSGQVEEGIAIFGDMERLWGISPK 283
           TL+GVLN CSHSG VEEG++IF DM  LWGI PK
Sbjct: 393 TLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPK 426



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 28/89 (31%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
 Frame = +2

Query: 8   YAKCGKIDCAKQVFDGTDRRDLLTWTSLISGLSMHGLGKEAVEIFTEMLA-EGIKPDNIT 184
           YA  G++  A+++FD    R+ ++W  +++G   H    EA++ F +ML  + +KP+   
Sbjct: 233 YAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAV 292

Query: 185 LVGVLNACSHSGQVEEG--IAIFGDMERL 265
           LV +L+AC+H G +++G  I ++ D  R+
Sbjct: 293 LVSILSACAHLGALDQGKWIHVYIDKNRI 321


>ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 684

 Score =  132 bits (332), Expect = 3e-29
 Identities = 59/94 (62%), Positives = 78/94 (82%)
 Frame = +2

Query: 2   DMYAKCGKIDCAKQVFDGTDRRDLLTWTSLISGLSMHGLGKEAVEIFTEMLAEGIKPDNI 181
           DMYAKCG+IDCA +VF+G  +RD+L++TS+ISGLS HGLGK+A+ +F +ML E + P+ I
Sbjct: 354 DMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEI 413

Query: 182 TLVGVLNACSHSGQVEEGIAIFGDMERLWGISPK 283
           T++GVLN CSHSG VEEG +I  +ME LWGI+PK
Sbjct: 414 TILGVLNGCSHSGLVEEGSSILANMESLWGIAPK 447


>emb|CBI15077.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/79 (75%), Positives = 69/79 (87%)
 Frame = +2

Query: 2   DMYAKCGKIDCAKQVFDGTDRRDLLTWTSLISGLSMHGLGKEAVEIFTEMLAEGIKPDNI 181
           DMYAKCG+IDCA++VFDG  +RDLLTWTS+ISGLSMHGLG E +  F+EMLAEG KPD+I
Sbjct: 303 DMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDI 362

Query: 182 TLVGVLNACSHSGQVEEGI 238
           TL+GVLN CSHSG VEE I
Sbjct: 363 TLLGVLNGCSHSGLVEEEI 381



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/94 (42%), Positives = 53/94 (56%)
 Frame = +2

Query: 2   DMYAKCGKIDCAKQVFDGTDRRDLLTWTSLISGLSMHGLGKEAVEIFTEMLAEGIKPDNI 181
           DMYAKCG+IDCA +VF+G  +RD+L++TS+ISGLS HGLGK+A+                
Sbjct: 506 DMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGKDAL---------------- 549

Query: 182 TLVGVLNACSHSGQVEEGIAIFGDMERLWGISPK 283
                            G +I  +ME LWGI+PK
Sbjct: 550 ----------------RGSSILANMESLWGIAPK 567



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/92 (36%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
 Frame = +2

Query: 2   DMYAKCGKIDCAKQVFDGTDRRDLLTWTSLISGLSMHG-LGKEAVEIFTEMLA-EGIKPD 175
           +MY+   ++  AK+VFD   +RD++TWTS++ G +M G    EA++ F +ML  + +KP+
Sbjct: 200 NMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGEFYNEALQCFNDMLCHDEVKPN 259

Query: 176 NITLVGVLNACSHSGQVEEG--IAIFGDMERL 265
              LV +L+AC+H G +++G  I ++ D  R+
Sbjct: 260 EAVLVSILSACAHLGALDQGKWIHVYIDKNRI 291



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
 Frame = +2

Query: 2   DMYAKCGKIDCAKQVFDGTDRRDLLTWTSLISGLSMHG-LGKEAVEIFTEMLAEG-IKPD 175
           +M +   +++ A++VF+    RD+ +WTSL+ G + HG + + ++  F  ML +  + P+
Sbjct: 403 NMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRASLTFFCNMLCDDRVNPN 462

Query: 176 NITLVGVLNACSHSGQVEEG 235
              LV VL+AC+H G +++G
Sbjct: 463 EAVLVCVLSACAHLGALDQG 482


>ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313808|gb|EFH44231.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 535

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/93 (54%), Positives = 72/93 (77%)
 Frame = +2

Query: 2   DMYAKCGKIDCAKQVFDGTDRRDLLTWTSLISGLSMHGLGKEAVEIFTEMLAEGIKPDNI 181
           DMY+KCGKID A +VF  T +RD+ TW S+I+GLS+HGLGK+A+EIF+EM+ EG KP+ I
Sbjct: 317 DMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGI 376

Query: 182 TLVGVLNACSHSGQVEEGIAIFGDMERLWGISP 280
           T +GVL+AC+H G +++   +F  M  ++GI P
Sbjct: 377 TFIGVLSACNHVGLLDQARKLFEMMNSVYGIEP 409



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = +2

Query: 8   YAKCGKIDCAKQVFDGTDRRDLLTWTSLISGLSMHGLGKEAVEIFTEMLAEGI-KPDNIT 184
           YA  G +  A++VFD    +D+++W ++++  +  G   E +E+F  ML +   +PD  T
Sbjct: 217 YAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFT 276

Query: 185 LVGVLNACSHSGQVEEG 235
           LV VL+AC+  G + +G
Sbjct: 277 LVNVLSACASLGSLSQG 293


>ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75098703|sp|O49399.2|PP321_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g18840 gi|5738365|emb|CAA16741.2| putative protein
           [Arabidopsis thaliana] gi|7268678|emb|CAB78886.1|
           putative protein [Arabidopsis thaliana]
           gi|332658697|gb|AEE84097.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 545

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/93 (52%), Positives = 70/93 (75%)
 Frame = +2

Query: 2   DMYAKCGKIDCAKQVFDGTDRRDLLTWTSLISGLSMHGLGKEAVEIFTEMLAEGIKPDNI 181
           DMY+KCGKID A +VF  T +RD+ TW S+IS LS+HGLGK+A+EIF+EM+ EG KP+ I
Sbjct: 347 DMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGI 406

Query: 182 TLVGVLNACSHSGQVEEGIAIFGDMERLWGISP 280
           T +GVL+AC+H G +++   +F  M  ++ + P
Sbjct: 407 TFIGVLSACNHVGMLDQARKLFEMMSSVYRVEP 439



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +2

Query: 8   YAKCGKIDCAKQVFDGTDRRDLLTWTSLISGLSMHGLGKEAVEIFTEMLAEGI-KPDNIT 184
           YA  G +  AK+VFD    RD+++W ++++  +  G   E +E+F +ML +   KPD  T
Sbjct: 247 YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFT 306

Query: 185 LVGVLNACSHSGQVEEG 235
           LV VL+AC+  G + +G
Sbjct: 307 LVSVLSACASLGSLSQG 323