BLASTX nr result

ID: Atractylodes21_contig00053186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053186
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25159.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_003625825.1| Pentatricopeptide repeat-containing protein ...    53   4e-06
emb|CBI20033.3| unnamed protein product [Vitis vinifera]               55   5e-06
ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containi...    55   5e-06

>emb|CBI25159.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -2

Query: 117 FINNHLKNNLTPNELLSFLKNHLHHHPKFAHLDLHVF 7
           F+  HL  + TP +LL FLKN LH+HPKFAH DLH+F
Sbjct: 159 FLKAHLTPSFTPQDLLIFLKNKLHYHPKFAHFDLHIF 195


>ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Vitis vinifera]
          Length = 588

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -2

Query: 117 FINNHLKNNLTPNELLSFLKNHLHHHPKFAHLDLHVF 7
           F+  HL  + TP +LL FLKN LH+HPKFAH DLH+F
Sbjct: 159 FLKAHLTPSFTPQDLLIFLKNKLHYHPKFAHFDLHIF 195


>ref|XP_003625825.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500840|gb|AES82043.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 485

 Score = 52.8 bits (125), Expect(2) = 4e-06
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = -2

Query: 120 NFINNHLKNNLTPNELLSFLKNHLHHHPKFAHLDLHVF 7
           +F+N+HL   LTP  L  FLK+ LHHHP F H D H+F
Sbjct: 48  HFLNHHLTPPLTPQTLTHFLKSKLHHHPSFTHFDFHLF 85



 Score = 22.7 bits (47), Expect(2) = 4e-06
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = -1

Query: 247 PSSTVVDSHQPPPPTATTRHITHCSPNPLSTFIYLNH 137
           P   +++   PPPP  TT  +   + +P   + +  H
Sbjct: 12  PPPPILNPPPPPPPPTTTTSLFPPTLSPTQHYTHFLH 48


>emb|CBI20033.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -2

Query: 117 FINNHLKNNLTPNELLSFLKNHLHHHPKFAHLDLHVF 7
           F+  HL  + TP +LL FLKN LH+HPKF+H DLH+F
Sbjct: 82  FLKAHLTPSFTPQDLLIFLKNKLHYHPKFSHFDLHIF 118


>ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Vitis vinifera]
          Length = 480

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -2

Query: 117 FINNHLKNNLTPNELLSFLKNHLHHHPKFAHLDLHVF 7
           F+  HL  + TP +LL FLKN LH+HPKF+H DLH+F
Sbjct: 51  FLKAHLTPSFTPQDLLIFLKNKLHYHPKFSHFDLHIF 87


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