BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053123
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   224   4e-57
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     223   1e-56
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   220   8e-56
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   219   2e-55
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   218   3e-55

>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  224 bits (572), Expect = 4e-57
 Identities = 107/145 (73%), Positives = 124/145 (85%)
 Frame = -1

Query: 437  LIGNDIPTLQSVKDWLGKCFAMKDLGDAAYILGIKIYRDRSKRLIGLSQDTYLDKILKRF 258
            L+GNDIP L+SVK  L K F+MKDLGDAAYILGI+IYRDRSKRLIGLSQ+ Y+DK+L RF
Sbjct: 577  LVGNDIPMLESVKSSLRKSFSMKDLGDAAYILGIRIYRDRSKRLIGLSQEMYIDKVLNRF 636

Query: 257  KMENSKKGNLPLHHGIKISKDLCPKTDEELDRMSQVPYASAIGSIMYAMACTRPDVSYAL 78
             M+NSK+G LP+ HGI +SK+ CP T +E D+MS +PYASAIGSIMYAM CTRPDVSYAL
Sbjct: 637  NMQNSKRGFLPMAHGINLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMICTRPDVSYAL 696

Query: 77   SMVSRYQQNPGEGHWIAVKNILKYL 3
            S+ SRYQ +P EGHW AVKNILKYL
Sbjct: 697  SVTSRYQADPSEGHWTAVKNILKYL 721


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  223 bits (569), Expect = 1e-56
 Identities = 108/145 (74%), Positives = 123/145 (84%)
 Frame = -1

Query: 437  LIGNDIPTLQSVKDWLGKCFAMKDLGDAAYILGIKIYRDRSKRLIGLSQDTYLDKILKRF 258
            LIGNDIP L+SVK  L   F+MKDLG+AAYILGI+IYRDRSKRLIGLSQ TY+DK+LKRF
Sbjct: 997  LIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 1056

Query: 257  KMENSKKGNLPLHHGIKISKDLCPKTDEELDRMSQVPYASAIGSIMYAMACTRPDVSYAL 78
             M +SKKG LP+ HGI +SK+ CP+T +E ++M  VPYASAIGSIMYAM CTRPDVSYAL
Sbjct: 1057 NMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYAL 1116

Query: 77   SMVSRYQQNPGEGHWIAVKNILKYL 3
            S  SRYQ +PGEGHW AVKNILKYL
Sbjct: 1117 SATSRYQSDPGEGHWTAVKNILKYL 1141


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  220 bits (561), Expect = 8e-56
 Identities = 106/145 (73%), Positives = 123/145 (84%)
 Frame = -1

Query: 437  LIGNDIPTLQSVKDWLGKCFAMKDLGDAAYILGIKIYRDRSKRLIGLSQDTYLDKILKRF 258
            LIGNDIP L+SVK  L   F+MKDLG+AAYILGI+IYRDRSKRLIGLSQ TY+DK+LKRF
Sbjct: 731  LIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 790

Query: 257  KMENSKKGNLPLHHGIKISKDLCPKTDEELDRMSQVPYASAIGSIMYAMACTRPDVSYAL 78
             M++SKKG LP+ HGI + K+ CP+T +E ++MS +PYASAIGSIMYAM CT PDVSYAL
Sbjct: 791  NMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTHPDVSYAL 850

Query: 77   SMVSRYQQNPGEGHWIAVKNILKYL 3
            S  SRYQ +PGE HWIAVKNILKYL
Sbjct: 851  SATSRYQSDPGESHWIAVKNILKYL 875


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  219 bits (558), Expect = 2e-55
 Identities = 106/145 (73%), Positives = 123/145 (84%)
 Frame = -1

Query: 437  LIGNDIPTLQSVKDWLGKCFAMKDLGDAAYILGIKIYRDRSKRLIGLSQDTYLDKILKRF 258
            LIGNDI  L+SVK  L   F+MKDLG+AAYILGI+IYRDRSKRLIGLSQ TY+DK+LKRF
Sbjct: 868  LIGNDISMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRF 927

Query: 257  KMENSKKGNLPLHHGIKISKDLCPKTDEELDRMSQVPYASAIGSIMYAMACTRPDVSYAL 78
             M++SKKG LP+ HGI + K+ CP+T +E ++MS +PYASAIGSIMYAM CTRPDVSYAL
Sbjct: 928  NMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYAL 987

Query: 77   SMVSRYQQNPGEGHWIAVKNILKYL 3
            S  SRYQ +PGE HWIAVKNILKYL
Sbjct: 988  SATSRYQSDPGESHWIAVKNILKYL 1012


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  218 bits (556), Expect = 3e-55
 Identities = 101/145 (69%), Positives = 121/145 (83%)
 Frame = -1

Query: 437  LIGNDIPTLQSVKDWLGKCFAMKDLGDAAYILGIKIYRDRSKRLIGLSQDTYLDKILKRF 258
            L+GNDIP LQSVK WLG CF+MKD+G+AAYILGI+IYRDR  ++IGLSQDTY+DK+L RF
Sbjct: 644  LLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRF 703

Query: 257  KMENSKKGNLPLHHGIKISKDLCPKTDEELDRMSQVPYASAIGSIMYAMACTRPDVSYAL 78
             M +SKKG +P+ HGI +SK  CP T +E +RMS++PYASAIGSIMYAM  TRPDV+ AL
Sbjct: 704  NMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACAL 763

Query: 77   SMVSRYQQNPGEGHWIAVKNILKYL 3
            SM SRYQ +PGE HWI V+NI KYL
Sbjct: 764  SMTSRYQSDPGESHWIVVRNIFKYL 788