BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00053120
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068729.1| putative reverse transcriptase [Soybean chlorot...    77   2e-12
ref|NP_861410.1| putative multifunctional pol protein [Cestrum y...    75   6e-12
ref|YP_006907834.1| polyprotein [Horseradish latent virus] gi|57...    60   1e-07
ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic prote...    57   2e-06
gb|AAA21736.1| reverse transcriptase [Cauliflower mosaic virus]        56   3e-06

>ref|NP_068729.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
           gi|18266821|sp|P15629.2|POL_SOCMV RecName:
           Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|11322953|emb|CAC16945.1| putative
           reverse transcriptase [Soybean chlorotic mottle virus]
          Length = 692

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/115 (40%), Positives = 58/115 (50%), Gaps = 20/115 (17%)
 Frame = +1

Query: 1   PNLYNPQNQDFLIVETDASKDTWSGCLRAIEKGKMLLGLNDDGSKIPDPIN--------- 153
           P LYN   QDFLIVETDAS+ +WSGCLRA+ KGK  +GL++ G    D            
Sbjct: 497 PKLYNASIQDFLIVETDASQHSWSGCLRALPKGKQKIGLDEFGIPTADLCTGSSSASSDN 556

Query: 154 -----------PKMNTNEIAEYKTERFEPKLCRYVSGTLSPAEQNYSTHEKETLA 285
                       K +T+  ++ K    E  LC+YVSGT +  E  Y   E E LA
Sbjct: 557 SPAEIDKCHSASKQDTHVASKIKKLENELLLCKYVSGTFTDTETRYPIAELEVLA 611


>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
           virus] gi|75559686|sp|Q7TD08.1|POL_CYLCV RecName:
           Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|32305282|gb|AAP78924.1| putative
           multifunctional pol protein [Cestrum yellow leaf curling
           virus]
          Length = 643

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/96 (42%), Positives = 54/96 (56%)
 Frame = +1

Query: 7   LYNPQNQDFLIVETDASKDTWSGCLRAIEKGKMLLGLNDDGSKIPDPINPKMNTNEIAEY 186
           LY P+ +D+LI+ETDAS DTW+GCL+A E                  + PK   N++ E 
Sbjct: 498 LYFPKPEDYLIIETDASGDTWAGCLKAAEL-----------------LFPKGTKNKVVE- 539

Query: 187 KTERFEPKLCRYVSGTLSPAEQNYSTHEKETLACLR 294
                  +LC+Y SG  S AEQ Y+ HEKETLA L+
Sbjct: 540 -------RLCKYTSGIFSSAEQKYTVHEKETLAALK 568


>ref|YP_006907834.1| polyprotein [Horseradish latent virus] gi|57790326|gb|AAW56089.1|
           polyprotein [Horseradish latent virus]
          Length = 679

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/98 (36%), Positives = 52/98 (53%)
 Frame = +1

Query: 1   PNLYNPQNQDFLIVETDASKDTWSGCLRAIEKGKMLLGLNDDGSKIPDPINPKMNTNEIA 180
           P L++P  ++ LI+ETDAS + W G L+AI                    +  ++TNE  
Sbjct: 535 PPLHHPLPEEKLIIETDASDNYWGGILKAI--------------------HIDLSTNESI 574

Query: 181 EYKTERFEPKLCRYVSGTLSPAEQNYSTHEKETLACLR 294
           E         +CRY SG+  PAEQNY +++KETLA +R
Sbjct: 575 EL--------VCRYASGSFKPAEQNYHSNDKETLAVIR 604


>ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
           Reverse transcriptase] [Carnation etched ring virus]
           gi|130593|sp|P05400.1|POL_CERV RecName: Full=Enzymatic
           polyprotein; Includes: RecName: Full=Aspartic protease;
           Includes: RecName: Full=Endonuclease; Includes: RecName:
           Full=Reverse transcriptase gi|58863|emb|CAA28360.1|
           unnamed protein product [Carnation etched ring virus]
           gi|225356|prf||1301227E ORF 5
          Length = 659

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/98 (33%), Positives = 48/98 (48%)
 Frame = +1

Query: 1   PNLYNPQNQDFLIVETDASKDTWSGCLRAIEKGKMLLGLNDDGSKIPDPINPKMNTNEIA 180
           P LY+P+  D L++ETDAS++ W G L+AI                        N++E  
Sbjct: 519 PKLYHPEPNDKLVIETDASEEFWGGILKAIH-----------------------NSHEY- 554

Query: 181 EYKTERFEPKLCRYVSGTLSPAEQNYSTHEKETLACLR 294
                     +CRY SG+   AE+NY ++EKE LA +R
Sbjct: 555 ----------ICRYASGSFKAAERNYHSNEKELLAVIR 582


>gb|AAA21736.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 680

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/97 (35%), Positives = 50/97 (51%)
 Frame = +1

Query: 1   PNLYNPQNQDFLIVETDASKDTWSGCLRAIEKGKMLLGLNDDGSKIPDPINPKMNTNEIA 180
           P L++P  ++ LI+ETDAS D W G L+AI              KI + IN ++      
Sbjct: 536 PPLHHPLPEEKLIIETDASDDYWGGMLKAI--------------KINEGINTEL------ 575

Query: 181 EYKTERFEPKLCRYVSGTLSPAEQNYSTHEKETLACL 291
                     +CRY SG+   AE+NY +++KETLA +
Sbjct: 576 ----------ICRYASGSFKAAERNYHSNDKETLAVI 602