BLASTX nr result

ID: Atractylodes21_contig00052935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052935
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
emb|CBI22055.3| unnamed protein product [Vitis vinifera]              114   1e-23
emb|CAN76431.1| hypothetical protein VITISV_033848 [Vitis vinifera]   101   6e-20
emb|CAB10276.1| hypothetical [Arabidopsis thaliana] gi|7268243|e...   100   1e-19
ref|NP_193233.5| fanconi anemia group D2 protein [Arabidopsis th...   100   1e-19

>ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1|
            predicted protein [Populus trichocarpa]
          Length = 1476

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/99 (58%), Positives = 74/99 (74%)
 Frame = +3

Query: 3    TTAEEYSHGFTTLCSSTFSVWYKELHEQNLIILRMLVKEAVQINKSRASSQPKEVQLLME 182
            TT E+  HGF TLC++TF VW + LHE N+ IL  LVKE     K RA+ Q + V+  + 
Sbjct: 1248 TTVEDDHHGFPTLCNATFVVWCRVLHEGNIAILNKLVKEIALFMKPRAAVQIEAVEKHLI 1307

Query: 183  KLHRSVNVVVSMINICKTHDKVTVRTMAVKYGGKFVDSF 299
            K+ +SVNVVVS++N+C+THDKVTVR M+VKYGGKFVDSF
Sbjct: 1308 KIQKSVNVVVSLVNLCRTHDKVTVRAMSVKYGGKFVDSF 1346


>emb|CBI22055.3| unnamed protein product [Vitis vinifera]
          Length = 1507

 Score =  114 bits (284), Expect = 1e-23
 Identities = 57/99 (57%), Positives = 71/99 (71%)
 Frame = +3

Query: 3    TTAEEYSHGFTTLCSSTFSVWYKELHEQNLIILRMLVKEAVQINKSRASSQPKEVQLLME 182
            TT E+  HGF TLC +TF++WY+ LHE+NL IL  LV   V   KSRA  Q   V+ L+ 
Sbjct: 1280 TTEEDDCHGFPTLCPATFNIWYRVLHEENLAILNKLVS-LVHSEKSRAGVQLGTVEELLI 1338

Query: 183  KLHRSVNVVVSMINICKTHDKVTVRTMAVKYGGKFVDSF 299
            KL +S NV+VS++N+C+T DKV V  MAVKYGGKFVDSF
Sbjct: 1339 KLQKSANVLVSLVNMCRTQDKVAVHAMAVKYGGKFVDSF 1377


>emb|CAN76431.1| hypothetical protein VITISV_033848 [Vitis vinifera]
          Length = 171

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/99 (53%), Positives = 65/99 (65%)
 Frame = +3

Query: 3   TTAEEYSHGFTTLCSSTFSVWYKELHEQNLIILRMLVKEAVQINKSRASSQPKEVQLLME 182
           TT E+  HGF TLC +TF++WY           R+LVKE V   KSRA  Q   V+ L+ 
Sbjct: 32  TTEEDDCHGFPTLCPATFNIWY-----------RVLVKEVVHSEKSRAGVQLGTVEELLI 80

Query: 183 KLHRSVNVVVSMINICKTHDKVTVRTMAVKYGGKFVDSF 299
           KL +S NV+VS+ N+C+T DKV V  MAVKYGGKFVDSF
Sbjct: 81  KLQKSANVLVSLXNMCRTQDKVAVHAMAVKYGGKFVDSF 119


>emb|CAB10276.1| hypothetical [Arabidopsis thaliana] gi|7268243|emb|CAB78539.1|
            hypothetical [Arabidopsis thaliana]
          Length = 1286

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/92 (50%), Positives = 67/92 (72%)
 Frame = +3

Query: 24   HGFTTLCSSTFSVWYKELHEQNLIILRMLVKEAVQINKSRASSQPKEVQLLMEKLHRSVN 203
            H F TLC++TF  WYK L E+NL IL  LVK     ++ R + QPK  +  ++ + ++VN
Sbjct: 1149 HEFPTLCAATFRGWYKTLLEENLAILNKLVKTVS--SEKRQNCQPKTTEAHLKNIQKTVN 1206

Query: 204  VVVSMINICKTHDKVTVRTMAVKYGGKFVDSF 299
            VVVS++N+C++H+KVT+  MA+KYGGK+VDSF
Sbjct: 1207 VVVSLVNLCRSHEKVTIHGMAIKYGGKYVDSF 1238


>ref|NP_193233.5| fanconi anemia group D2 protein [Arabidopsis thaliana]
            gi|332658132|gb|AEE83532.1| fanconi anemia group D2
            protein [Arabidopsis thaliana]
          Length = 1489

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/92 (50%), Positives = 67/92 (72%)
 Frame = +3

Query: 24   HGFTTLCSSTFSVWYKELHEQNLIILRMLVKEAVQINKSRASSQPKEVQLLMEKLHRSVN 203
            H F TLC++TF  WYK L E+NL IL  LVK     ++ R + QPK  +  ++ + ++VN
Sbjct: 1293 HEFPTLCAATFRGWYKTLLEENLAILNKLVKTVS--SEKRQNCQPKTTEAHLKNIQKTVN 1350

Query: 204  VVVSMINICKTHDKVTVRTMAVKYGGKFVDSF 299
            VVVS++N+C++H+KVT+  MA+KYGGK+VDSF
Sbjct: 1351 VVVSLVNLCRSHEKVTIHGMAIKYGGKYVDSF 1382


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