BLASTX nr result

ID: Atractylodes21_contig00052888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052888
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523146.1| nucleic acid binding protein, putative [Rici...   112   4e-23
gb|AAO00844.1| Unknown protein [Arabidopsis thaliana]                 107   1e-21
ref|NP_849735.1| toprim domain-containing protein [Arabidopsis t...   107   1e-21
ref|NP_174354.4| nucleic acid binding protein [Arabidopsis thali...   106   2e-21
ref|XP_002299018.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20

>ref|XP_002523146.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223537553|gb|EEF39177.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 700

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/69 (78%), Positives = 60/69 (86%)
 Frame = -2

Query: 208 DKLSMEQAGIQNCVSVPDGAPQQVSMKLLPSKIQDTRYKYLSNCNGYLDKASRIVLATDG 29
           DKL+ME+AG +NCVSVPDGAP QVS K LPSK QDT+Y+YL NC  YLDKASRI+LATDG
Sbjct: 292 DKLAMEEAGFRNCVSVPDGAPGQVSQKELPSKEQDTKYQYLWNCKEYLDKASRIILATDG 351

Query: 28  DGPGQALAE 2
           D PGQALAE
Sbjct: 352 DPPGQALAE 360


>gb|AAO00844.1| Unknown protein [Arabidopsis thaliana]
          Length = 709

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/69 (72%), Positives = 60/69 (86%)
 Frame = -2

Query: 208 DKLSMEQAGIQNCVSVPDGAPQQVSMKLLPSKIQDTRYKYLSNCNGYLDKASRIVLATDG 29
           DKL+ME+AG  NCVSVPDGAP +VS K +PS+ +DT+YK+L NCN YL KASRIV+ATDG
Sbjct: 290 DKLAMEEAGFLNCVSVPDGAPAKVSSKEIPSEDKDTKYKFLWNCNDYLKKASRIVIATDG 349

Query: 28  DGPGQALAE 2
           DGPGQA+AE
Sbjct: 350 DGPGQAMAE 358


>ref|NP_849735.1| toprim domain-containing protein [Arabidopsis thaliana]
           gi|209529811|gb|ACI49800.1| At1g30680 [Arabidopsis
           thaliana] gi|332193138|gb|AEE31259.1| toprim
           domain-containing protein [Arabidopsis thaliana]
          Length = 709

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/69 (72%), Positives = 60/69 (86%)
 Frame = -2

Query: 208 DKLSMEQAGIQNCVSVPDGAPQQVSMKLLPSKIQDTRYKYLSNCNGYLDKASRIVLATDG 29
           DKL+ME+AG  NCVSVPDGAP +VS K +PS+ +DT+YK+L NCN YL KASRIV+ATDG
Sbjct: 290 DKLAMEEAGFLNCVSVPDGAPAKVSSKEIPSEDKDTKYKFLWNCNDYLKKASRIVIATDG 349

Query: 28  DGPGQALAE 2
           DGPGQA+AE
Sbjct: 350 DGPGQAMAE 358


>ref|NP_174354.4| nucleic acid binding protein [Arabidopsis thaliana]
           gi|332193136|gb|AEE31257.1| nucleic acid binding protein
           [Arabidopsis thaliana]
          Length = 337

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/69 (72%), Positives = 59/69 (85%)
 Frame = -2

Query: 208 DKLSMEQAGIQNCVSVPDGAPQQVSMKLLPSKIQDTRYKYLSNCNGYLDKASRIVLATDG 29
           DKL+ME+AG  NCVSVPDGAP+ VS K +PS+ +DT +KY+ NCN YL KASRIV+ATDG
Sbjct: 215 DKLAMEEAGFFNCVSVPDGAPETVSSKEIPSESKDTAFKYIWNCNDYLKKASRIVIATDG 274

Query: 28  DGPGQALAE 2
           DGPGQALAE
Sbjct: 275 DGPGQALAE 283


>ref|XP_002299018.1| predicted protein [Populus trichocarpa] gi|222846276|gb|EEE83823.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/69 (71%), Positives = 56/69 (81%)
 Frame = -2

Query: 208 DKLSMEQAGIQNCVSVPDGAPQQVSMKLLPSKIQDTRYKYLSNCNGYLDKASRIVLATDG 29
           DKL+ME+AG +NCVSVPDGAP  VS K LP   +DT+Y+YL NC  YLDK SRI+LATDG
Sbjct: 238 DKLAMEEAGFRNCVSVPDGAPPSVSPKELPPNQEDTKYQYLWNCKEYLDKVSRIILATDG 297

Query: 28  DGPGQALAE 2
           D PGQALAE
Sbjct: 298 DPPGQALAE 306


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