BLASTX nr result

ID: Atractylodes21_contig00052879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052879
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX99553.1| ribosomal protein S3 (chloroplast) [Chrysanthemum...   261   5e-68
ref|YP_007353805.1| ribosomal protein S3 (chloroplast) [Chrysant...   261   5e-68
ref|YP_588156.1| ribosomal protein S3 [Helianthus annuus] gi|122...   259   2e-67
ref|YP_398367.1| ribosomal protein S3 [Lactuca sativa] gi|912077...   257   8e-67
ref|YP_001837399.1| ribosomal protein S3 [Guizotia abyssinica] g...   256   2e-66

>gb|AEX99553.1| ribosomal protein S3 (chloroplast) [Chrysanthemum indicum]
          Length = 219

 Score =  261 bits (666), Expect = 5e-68
 Identities = 131/131 (100%), Positives = 131/131 (100%)
 Frame = +1

Query: 1   RPRGIEELQMNLQKEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK 180
           RPRGIEELQMNLQKEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK
Sbjct: 89  RPRGIEELQMNLQKEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK 148

Query: 181 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 360
           AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL
Sbjct: 149 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 208

Query: 361 GIKIWIFIDGE 393
           GIKIWIFIDGE
Sbjct: 209 GIKIWIFIDGE 219


>ref|YP_007353805.1| ribosomal protein S3 (chloroplast) [Chrysanthemum x morifolium]
           gi|452849090|ref|YP_007474768.1| ribosomal protein S3
           (chloroplast) [Chrysanthemum indicum]
           gi|372863245|gb|AEX99317.1| ribosomal protein S3
           (chloroplast) [Chrysanthemum indicum]
           gi|375298875|gb|AFA45314.1| ribosomal protein S3
           (chloroplast) [Chrysanthemum x morifolium]
          Length = 218

 Score =  261 bits (666), Expect = 5e-68
 Identities = 131/131 (100%), Positives = 131/131 (100%)
 Frame = +1

Query: 1   RPRGIEELQMNLQKEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK 180
           RPRGIEELQMNLQKEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK
Sbjct: 88  RPRGIEELQMNLQKEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK 147

Query: 181 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 360
           AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL
Sbjct: 148 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 207

Query: 361 GIKIWIFIDGE 393
           GIKIWIFIDGE
Sbjct: 208 GIKIWIFIDGE 218


>ref|YP_588156.1| ribosomal protein S3 [Helianthus annuus]
           gi|122237664|sp|Q1KXS0.1|RR3_HELAN RecName: Full=30S
           ribosomal protein S3, chloroplastic
           gi|88656933|gb|ABD47184.1| ribosomal protein S3
           [Helianthus annuus]
          Length = 218

 Score =  259 bits (662), Expect = 2e-67
 Identities = 130/131 (99%), Positives = 131/131 (100%)
 Frame = +1

Query: 1   RPRGIEELQMNLQKEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK 180
           RPRGIEELQMNLQKEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK
Sbjct: 88  RPRGIEELQMNLQKEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK 147

Query: 181 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 360
           AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL
Sbjct: 148 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 207

Query: 361 GIKIWIFIDGE 393
           GIKIWIFI+GE
Sbjct: 208 GIKIWIFIEGE 218


>ref|YP_398367.1| ribosomal protein S3 [Lactuca sativa]
           gi|91207769|sp|Q332T8.1|RR3_LACSA RecName: Full=30S
           ribosomal protein S3, chloroplastic
           gi|78675208|dbj|BAE47634.1| chloroplast 30S ribosomal
           protein S3 [Lactuca sativa] gi|88657021|gb|ABD47271.1|
           ribosomal protein S3 [Lactuca sativa]
          Length = 218

 Score =  257 bits (656), Expect = 8e-67
 Identities = 129/131 (98%), Positives = 130/131 (99%)
 Frame = +1

Query: 1   RPRGIEELQMNLQKEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK 180
           RPRGIEELQMNLQKEF+SVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK
Sbjct: 88  RPRGIEELQMNLQKEFHSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK 147

Query: 181 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 360
           AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYC YTVRTIYGVL
Sbjct: 148 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYTVRTIYGVL 207

Query: 361 GIKIWIFIDGE 393
           GIKIWIFIDGE
Sbjct: 208 GIKIWIFIDGE 218


>ref|YP_001837399.1| ribosomal protein S3 [Guizotia abyssinica]
           gi|179366294|gb|ACB86565.1| ribosomal protein S3
           [Guizotia abyssinica]
          Length = 218

 Score =  256 bits (653), Expect = 2e-66
 Identities = 128/131 (97%), Positives = 130/131 (99%)
 Frame = +1

Query: 1   RPRGIEELQMNLQKEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK 180
           RPRGIEELQMNLQKEF+S NRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK
Sbjct: 88  RPRGIEELQMNLQKEFHSANRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKK 147

Query: 181 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 360
           AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL
Sbjct: 148 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 207

Query: 361 GIKIWIFIDGE 393
           GIKIWIFI+GE
Sbjct: 208 GIKIWIFIEGE 218


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