BLASTX nr result

ID: Atractylodes21_contig00052811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052811
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24253.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10
ref|XP_002313262.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09

>emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/76 (43%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = +3

Query: 6   IDDALILYDMLID-KNDVKPDVRTYNLLIQGLCKENRISEAAEIHQKMLTNKISGNVITY 182
           +D+AL L++ + D +N ++P+V T+N+LI GLCKE R+++A +IH+KM+     GN++TY
Sbjct: 259 VDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTY 318

Query: 183 NSLVYAYLRSGKVEKA 230
           N L+   L++GK+++A
Sbjct: 319 NMLLGGCLKAGKIKEA 334


>ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/76 (43%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = +3

Query: 6   IDDALILYDMLID-KNDVKPDVRTYNLLIQGLCKENRISEAAEIHQKMLTNKISGNVITY 182
           +D+AL L++ + D +N ++P+V T+N+LI GLCKE R+++A +IH+KM+     GN++TY
Sbjct: 405 VDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTY 464

Query: 183 NSLVYAYLRSGKVEKA 230
           N L+   L++GK+++A
Sbjct: 465 NMLLGGCLKAGKIKEA 480


>ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = +3

Query: 6   IDDALILYDMLI-DKNDVKPDVRTYNLLIQGLCKENRISEAAEIHQKMLTNKISGNVITY 182
           I +A+ L+ +L+ +K  VKPDV T N LIQGLCKE R+ +AA IH  M+   + GN++TY
Sbjct: 376 IHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTY 435

Query: 183 NSLVYAYLRSGKVEKA 230
           N L+  YL + K+ +A
Sbjct: 436 NFLIEGYLAARKLIEA 451


>ref|XP_002313262.1| predicted protein [Populus trichocarpa] gi|222849670|gb|EEE87217.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/76 (43%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = +3

Query: 6   IDDALILYDMLI-DKNDVKPDVRTYNLLIQGLCKENRISEAAEIHQKMLTNKISGNVITY 182
           +D+A+ L+  L+ D N V+PDV T+N +IQGLCKE R+ +A EI+  M+     GN+ T 
Sbjct: 236 LDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTC 295

Query: 183 NSLVYAYLRSGKVEKA 230
           + L+  Y++SG ++KA
Sbjct: 296 HILIGEYIKSGIIDKA 311



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/72 (38%), Positives = 46/72 (63%)
 Frame = +3

Query: 15  ALILYDMLIDKNDVKPDVRTYNLLIQGLCKENRISEAAEIHQKMLTNKISGNVITYNSLV 194
           AL L+D++ +K + +P   TYN+LI GLCKE  I +A +I + ML       V++YN+L+
Sbjct: 169 ALDLFDLMTEKGE-EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLI 227

Query: 195 YAYLRSGKVEKA 230
                +GK+++A
Sbjct: 228 MGLCNNGKLDEA 239


>ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/75 (42%), Positives = 49/75 (65%)
 Frame = +3

Query: 6   IDDALILYDMLIDKNDVKPDVRTYNLLIQGLCKENRISEAAEIHQKMLTNKISGNVITYN 185
           + DAL ++  +  K   KPD+ T+N LI GLCK N+  EA  ++Q ML   +  N ITYN
Sbjct: 100 VQDALNMFGDMSSKG-CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 158

Query: 186 SLVYAYLRSGKVEKA 230
           +L++A+LR G +++A
Sbjct: 159 TLIHAFLRRGAMQEA 173


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