BLASTX nr result

ID: Atractylodes21_contig00052795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052795
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera]    88   6e-16
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                              86   2e-15
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]    86   3e-15
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    84   2e-14
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]    83   3e-14

>emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera]
          Length = 726

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
 Frame = +3

Query: 3   QNQGGTNGDSE----MTTRASQRVIRPPNRYGDWLYANMSFTDQLDYALHVVQDEPMDFE 170
           +N G +N + +    +    S+R I+PP RYG        F D +  AL     +P  F+
Sbjct: 327 RNAGKSNSEDQQHHSIAIDRSRRTIKPPTRYG--------FEDLVSDALITSSGDPTTFQ 378

Query: 171 DALSSSHSSRWLGAMQEEMEALSKNNTWDLVPLLKGNWAIGCKWIFKVKD 320
           +A+ +   SRW+G M E++++L KN TWDLV LL+G  AIGCKW++K K+
Sbjct: 379 EAMHNQEKSRWIGVMMEKIQSLHKNQTWDLVELLEGKRAIGCKWVYKKKE 428


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/99 (47%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
 Frame = +3

Query: 39   TTRASQRVIRPPNRYGDWLYANMSFTDQLDYALHVVQDEPMDFEDALSSSHSSRWLGAMQ 218
            TTR S R  R P  + D++         + Y L     EP  F++A++SS  S+W  AMQ
Sbjct: 747  TTRQSDREKRRPTWHSDYVMEG-----NVAYCLLTEDGEPSTFQEAINSSDVSQWTAAMQ 801

Query: 219  EEMEALSKNNTWDLVPLLKGNWAIGCKWIFKVK---DDQ 326
            EE+EAL KNNTWDLVPL +G   IG KW+FK+K   DDQ
Sbjct: 802  EEIEALHKNNTWDLVPLPQGRKPIGNKWVFKIKRNGDDQ 840


>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
          Length = 595

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/89 (44%), Positives = 56/89 (62%)
 Frame = +3

Query: 54  QRVIRPPNRYGDWLYANMSFTDQLDYALHVVQDEPMDFEDALSSSHSSRWLGAMQEEMEA 233
           +R I+PP RYG        F D + YAL     +P+ F++A+ +   SRW+GAM EE++ 
Sbjct: 135 RRTIKPPTRYG--------FEDLVSYALITSSKDPITFQEAIHNQEKSRWMGAMVEEIQF 186

Query: 234 LSKNNTWDLVPLLKGNWAIGCKWIFKVKD 320
           L KN TWDLV   +G  AIGCKW++K K+
Sbjct: 187 LHKNQTWDLVEPPEGKRAIGCKWVYKKKE 215


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/96 (43%), Positives = 56/96 (58%)
 Frame = +3

Query: 36   MTTRASQRVIRPPNRYGDWLYANMSFTDQLDYALHVVQDEPMDFEDALSSSHSSRWLGAM 215
            +  R  +R I+ P+R          F D + YAL VV D P  + +A+ SS S  W GAM
Sbjct: 760  IAVRRQRRDIQKPSR----------FMDMVAYALPVVDDIPSTYPEAIMSSESGNWAGAM 809

Query: 216  QEEMEALSKNNTWDLVPLLKGNWAIGCKWIFKVKDD 323
            +EEM++L KN TW L  L KG  AIGCKW+F  K++
Sbjct: 810  EEEMQSLKKNKTWKLAQLPKGKKAIGCKWVFAKKEE 845


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
 Frame = +3

Query: 21   NGDSEMTTRASQRVIRPPNRYGDWLYANMSFTDQLDYALHVVQD----EPMDFEDALSSS 188
            N    +     +R IR P RY D + AN+  T+ + +AL V ++    EP  +++A+ S 
Sbjct: 867  NDSQSIAAHRPRREIRRPMRYVDCVSANI--TNPVAFALAVAEEIGREEPRSYKEAMESK 924

Query: 189  HSSRWLGAMQEEMEALSKNNTWDLVPLLKGNWAIGCKWIFKVKD 320
             S +WL +M +EM +L KN TW+LVPL +G   + CKW+FK+KD
Sbjct: 925  DSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKD 968


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