BLASTX nr result

ID: Atractylodes21_contig00052752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052752
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523355.1| RING-H2 finger protein ATL3K, putative [Rici...   101   6e-20
ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein A...   100   1e-19
ref|XP_002302627.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|NP_850456.2| RING/U-box domain-containing protein [Arabidops...    96   2e-18
ref|XP_003626572.1| RING-H2 finger protein ATL1E [Medicago trunc...    95   5e-18

>ref|XP_002523355.1| RING-H2 finger protein ATL3K, putative [Ricinus communis]
           gi|223537443|gb|EEF39071.1| RING-H2 finger protein
           ATL3K, putative [Ricinus communis]
          Length = 374

 Score =  101 bits (252), Expect = 6e-20
 Identities = 39/54 (72%), Positives = 46/54 (85%)
 Frame = +2

Query: 2   TCPICLSEYHVKETVRCIPECRHCFHTGCIDEWLKLNGTCPICRNSPSPVHAES 163
           TC ICL+EY  KET+RCIPEC+HCFH  CIDEWLK+N +CP+CRNSPSP+H  S
Sbjct: 318 TCAICLAEYRSKETLRCIPECKHCFHVECIDEWLKMNSSCPVCRNSPSPLHDRS 371


>ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
           gi|297745433|emb|CBI40513.3| unnamed protein product
           [Vitis vinifera]
          Length = 372

 Score =  100 bits (249), Expect = 1e-19
 Identities = 38/51 (74%), Positives = 46/51 (90%)
 Frame = +2

Query: 2   TCPICLSEYHVKETVRCIPECRHCFHTGCIDEWLKLNGTCPICRNSPSPVH 154
           TCPICLS+Y  KET+RCIP+C HCFH  CIDEWL++NG+CP+CRNSPSPV+
Sbjct: 319 TCPICLSDYCTKETLRCIPDCGHCFHAECIDEWLRVNGSCPVCRNSPSPVY 369


>ref|XP_002302627.1| predicted protein [Populus trichocarpa] gi|222844353|gb|EEE81900.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 38/54 (70%), Positives = 44/54 (81%)
 Frame = +2

Query: 2   TCPICLSEYHVKETVRCIPECRHCFHTGCIDEWLKLNGTCPICRNSPSPVHAES 163
           TC ICLSEY+ KETVR IPEC+HCFH  C+DEWL++N TCP+CR SPSP H  S
Sbjct: 317 TCAICLSEYNSKETVRIIPECKHCFHADCVDEWLRMNSTCPVCRKSPSPAHVRS 370


>ref|NP_850456.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|302595617|sp|P0CH01.1|AT21A_ARATH RecName:
           Full=Putative RING-H2 finger protein ATL21A; Flags:
           Precursor gi|330255613|gb|AEC10707.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 372

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 38/48 (79%), Positives = 43/48 (89%)
 Frame = +2

Query: 5   CPICLSEYHVKETVRCIPECRHCFHTGCIDEWLKLNGTCPICRNSPSP 148
           CPICLSEY  KETVRCIPEC HCFH+ CID WLK++G+CP+CRNSPSP
Sbjct: 320 CPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCRNSPSP 367


>ref|XP_003626572.1| RING-H2 finger protein ATL1E [Medicago truncatula]
           gi|355501587|gb|AES82790.1| RING-H2 finger protein ATL1E
           [Medicago truncatula]
          Length = 370

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 35/51 (68%), Positives = 43/51 (84%)
 Frame = +2

Query: 5   CPICLSEYHVKETVRCIPECRHCFHTGCIDEWLKLNGTCPICRNSPSPVHA 157
           C ICLSEY+ K+ +RCIPEC+HCFH  CIDEWL++N TCP+CRNSP P H+
Sbjct: 314 CSICLSEYNSKDIIRCIPECKHCFHAHCIDEWLRMNATCPVCRNSPFPSHS 364


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