BLASTX nr result

ID: Atractylodes21_contig00052724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052724
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...   175   4e-42
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   174   5e-42
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   162   3e-38
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...   113   1e-23
emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]    87   1e-15

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score =  175 bits (443), Expect = 4e-42
 Identities = 79/125 (63%), Positives = 106/125 (84%)
 Frame = -2

Query: 378 EAVKVRLAKLCMEGSTIHWFNLLKETEDDLTWMKLKRALIERYGGRQSDNPFEELKDLKQ 199
           + ++V+LA+L MEGSTIHWFNLL ETED+L+W KLKRALI RYGGR+ +NPFEEL  ++Q
Sbjct: 85  DKMRVKLARLSMEGSTIHWFNLLMETEDELSWEKLKRALIARYGGRRLENPFEELSTIRQ 144

Query: 198 MGTVDEYIIQFEYISSQVGRLPEEQYLGYFVGGLRSEIRLRLRTFNPRNRVQAMKLARDI 19
            G+V+E++  FE +SSQVGRLPEEQYLGYF+ GL+ +IR R+RT NP NR+Q M++A+D+
Sbjct: 145 KGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIRRRVRTLNPLNRMQMMRIAKDV 204

Query: 18  EAEVR 4
           E E++
Sbjct: 205 EEELK 209


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  174 bits (442), Expect = 5e-42
 Identities = 79/123 (64%), Positives = 105/123 (85%)
 Frame = -2

Query: 372 VKVRLAKLCMEGSTIHWFNLLKETEDDLTWMKLKRALIERYGGRQSDNPFEELKDLKQMG 193
           ++V+LA+L MEGSTIHWFNLL ETED+L+W  LKRALI RYGGR+ +NPFEEL  L+Q G
Sbjct: 104 MRVKLARLSMEGSTIHWFNLLMETEDELSWENLKRALIARYGGRRLENPFEELSTLRQKG 163

Query: 192 TVDEYIIQFEYISSQVGRLPEEQYLGYFVGGLRSEIRLRLRTFNPRNRVQAMKLARDIEA 13
           +V+E++  FE +SSQVGRLPEEQYLGYF+ GL+ +IR R+RT NPRNR++ M++A+D+E 
Sbjct: 164 SVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIRRRVRTLNPRNRMEMMRIAKDVED 223

Query: 12  EVR 4
           E++
Sbjct: 224 ELK 226


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/122 (61%), Positives = 101/122 (82%)
 Frame = -2

Query: 372  VKVRLAKLCMEGSTIHWFNLLKETEDDLTWMKLKRALIERYGGRQSDNPFEELKDLKQMG 193
            ++V+L++L MEG TIHWFNLL ETEDDL+  KLK+ALI RY GR+ +NPFEEL  L+Q+G
Sbjct: 777  MRVKLSRLSMEGPTIHWFNLLMETEDDLSREKLKKALIARYDGRRLENPFEELSTLRQIG 836

Query: 192  TVDEYIIQFEYISSQVGRLPEEQYLGYFVGGLRSEIRLRLRTFNPRNRVQAMKLARDIEA 13
            +V+E++  FE +SSQVGRLPEEQYLGYF+ GL++ IR R+RT NP  R+Q M++A+D+E 
Sbjct: 837  SVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKAHIRRRVRTLNPTTRMQMMRIAKDVED 896

Query: 12   EV 7
            E+
Sbjct: 897  EL 898


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/102 (52%), Positives = 74/102 (72%)
 Frame = -2

Query: 372 VKVRLAKLCMEGSTIHWFNLLKETEDDLTWMKLKRALIERYGGRQSDNPFEELKDLKQMG 193
           +KV LA+LCM+G TIH+F  L E  + LTW  LK AL+ERYGG    N FE+L  L+Q G
Sbjct: 114 IKVNLAQLCMDGPTIHFFKGLLEENETLTWEDLKDALLERYGGVSDGNVFEQLSALQQEG 173

Query: 192 TVDEYIIQFEYISSQVGRLPEEQYLGYFVGGLRSEIRLRLRT 67
           T++EYI  FE + +Q+ +LP +QYLGYFV GL+ +IR ++R+
Sbjct: 174 TIEEYIADFERLVAQLPKLPNDQYLGYFVHGLKDKIRGKVRS 215


>emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]
          Length = 446

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/123 (39%), Positives = 72/123 (58%)
 Frame = -2

Query: 378 EAVKVRLAKLCMEGSTIHWFNLLKETEDDLTWMKLKRALIERYGGRQSDNPFEELKDLKQ 199
           E  KV LA   +EG    W+ +LKE E ++ W+ LK  L  RYG  + D+ F +L  LKQ
Sbjct: 186 EEEKVPLATYHLEGEAQLWYQILKE-EGEVAWLTLKEGLNSRYGPTEFDDFFGDLTRLKQ 244

Query: 198 MGTVDEYIIQFEYISSQVGRLPEEQYLGYFVGGLRSEIRLRLRTFNPRNRVQAMKLARDI 19
           +G+V EY  QFE + S+VG+L + Q +  F+GGL  ++R+ ++   P     A+ LAR  
Sbjct: 245 VGSVREYQSQFEKLLSRVGKLNQSQQVACFIGGLNEDVRIDVQAMKPPTLSAAVGLARLY 304

Query: 18  EAE 10
           E +
Sbjct: 305 EVK 307


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