BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052679
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM55238.1| integrase [Beta vulgaris]                               80   2e-19
gb|ABH08430.1| putative integrase [Beta vulgaris]                      80   2e-19
ref|ZP_06597243.1| putative integrase core domain protein, parti...    72   1e-17
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]                 74   1e-16
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                   74   1e-16

>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score = 80.5 bits (197), Expect(2) = 2e-19
 Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
 Frame = -2

Query: 355 SCTSPLQLLHMDLCSSNIISL--AKKYILVIVNEYSKYTWIFFFMLKSEAKEEVINFIKR 182
           S T PL+L+H+DLC    I     K+Y+LVIV++YS+YTW+ F   K E  +E + F KR
Sbjct: 744 STTKPLELIHIDLCGPMRIQSRSGKRYVLVIVDDYSRYTWVIFLSSKDETYDEFLVFAKR 803

Query: 181 VEVLLQKIVQNIRSDHGTEFKN 116
           V+ L    + +IRSDHG EF+N
Sbjct: 804 VQNLSGHKIMHIRSDHGKEFEN 825



 Score = 40.0 bits (92), Expect(2) = 2e-19
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = -1

Query: 107 DEFLRNKGIGHNILAAKTPQHNVIVERKNITLIE 6
           D+  R+ G+ HN  A +TPQ N +VERKN TL E
Sbjct: 829 DDLSRDNGLDHNFSAPRTPQQNGVVERKNRTLEE 862


>gb|ABH08430.1| putative integrase [Beta vulgaris]
          Length = 1516

 Score = 80.5 bits (197), Expect(2) = 2e-19
 Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
 Frame = -2

Query: 355 SCTSPLQLLHMDLCSSNIISL--AKKYILVIVNEYSKYTWIFFFMLKSEAKEEVINFIKR 182
           S T PL+L+H+DLC    I     K+Y+LVIV++YS+YTW+ F   K E  +E + F KR
Sbjct: 744 STTKPLELIHIDLCGPMRIQSRSGKRYVLVIVDDYSRYTWVIFLSSKDETYDEFLVFAKR 803

Query: 181 VEVLLQKIVQNIRSDHGTEFKN 116
           V+ L    + +IRSDHG EF+N
Sbjct: 804 VQNLSGHKIMHIRSDHGKEFEN 825



 Score = 40.0 bits (92), Expect(2) = 2e-19
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = -1

Query: 107 DEFLRNKGIGHNILAAKTPQHNVIVERKNITLIE 6
           D+  R+ G+ HN  A +TPQ N +VERKN TL E
Sbjct: 829 DDLSRDNGLDHNFSAPRTPQQNGVVERKNRTLEE 862


>ref|ZP_06597243.1| putative integrase core domain protein, partial [Bifidobacterium
           breve DSM 20213 = JCM 1192] gi|291380530|gb|EFE88048.1|
           putative integrase core domain protein [Bifidobacterium
           breve DSM 20213 = JCM 1192]
          Length = 188

 Score = 72.4 bits (176), Expect(2) = 1e-17
 Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
 Frame = -2

Query: 355 SCTSPLQLLHMDLCSS-NIISLA-KKYILVIVNEYSKYTWIFFFMLKSEAKEEVINFIKR 182
           S + PL+LLHMDL      IS+   KY LVIV+++S++TW+FF   KSEAK  V  FI+R
Sbjct: 31  STSRPLKLLHMDLFGPIAYISIGGNKYGLVIVDDFSRFTWVFFLKDKSEAKGVVKKFIRR 90

Query: 181 VEVLLQKIVQNIRSDHGTEFKN 116
           V+   +  V+NIRSD+ +EF+N
Sbjct: 91  VQNEFELKVKNIRSDNSSEFRN 112



 Score = 42.0 bits (97), Expect(2) = 1e-17
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = -1

Query: 110 LDEFLRNKGIGHNILAAKTPQHNVIVERKNITLIE 6
           ++EFL  +GI H + A  TPQ N +VERKN TLIE
Sbjct: 115 VEEFLDEEGIKHELSAPYTPQQNGVVERKNRTLIE 149


>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
          Length = 1892

 Score = 73.6 bits (179), Expect(2) = 1e-16
 Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
 Frame = -2

Query: 343  PLQLLHMDLCSS-NIISLA-KKYILVIVNEYSKYTWIFFFMLKSEAKEEVINFIKRVEVL 170
            PL+LLHMDL      IS+   KY LVIV++YS++TW+FF   KS+ +E +  F++R +  
Sbjct: 1010 PLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQNE 1069

Query: 169  LQKIVQNIRSDHGTEFKNATWMSF*E 92
                ++ IRSD+GTEFKN+   SF E
Sbjct: 1070 FGLRIKKIRSDNGTEFKNSQIESFLE 1095



 Score = 37.4 bits (85), Expect(2) = 1e-16
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -1

Query: 110  LDEFLRNKGIGHNILAAKTPQHNVIVERKNITLIE 6
            ++ FL  +GI H   +  TPQ N +VERKN TL++
Sbjct: 1090 IESFLEEEGIKHEFSSPYTPQQNGVVERKNRTLLD 1124


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score = 73.6 bits (179), Expect(2) = 1e-16
 Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
 Frame = -2

Query: 343 PLQLLHMDLCSS-NIISLA-KKYILVIVNEYSKYTWIFFFMLKSEAKEEVINFIKRVEVL 170
           PL+LLHMDL      IS+   KY LVIV++YS++TW+FF   KS+ +E +  F++R +  
Sbjct: 181 PLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQNE 240

Query: 169 LQKIVQNIRSDHGTEFKNATWMSF*E 92
               ++ IRSD+GTEFKN+   SF E
Sbjct: 241 FGLRIKKIRSDNGTEFKNSQIESFLE 266



 Score = 37.4 bits (85), Expect(2) = 1e-16
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -1

Query: 110 LDEFLRNKGIGHNILAAKTPQHNVIVERKNITLIE 6
           ++ FL  +GI H   +  TPQ N +VERKN TL++
Sbjct: 261 IESFLEEEGIKHEFSSPYTPQQNGVVERKNRTLLD 295