BLASTX nr result

ID: Atractylodes21_contig00052675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052675
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   110   9e-23
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   106   2e-21
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   106   2e-21
emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]   106   2e-21
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         106   2e-21

>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101216349 [Cucumis sativus]
          Length = 1830

 Score =  110 bits (276), Expect = 9e-23
 Identities = 50/82 (60%), Positives = 59/82 (71%)
 Frame = +3

Query: 12  MVRGMPTLDNKSQQCEACALGKLSRNSFPNNEAWRASRLLELIHTDVCGPMRTPSIGRKR 191
           MVRGM  +  + Q CEAC  GK  RNSFP   +WRAS+ LEL+HTD+CGPMRT + G  R
Sbjct: 459 MVRGMSNIKKEDQLCEACVFGKHHRNSFPTGGSWRASKPLELVHTDLCGPMRTTTHGGNR 518

Query: 192 YILTFIDDFSRKAWVCFLHEKS 257
           Y LTFIDD+SRK W+  L EKS
Sbjct: 519 YFLTFIDDYSRKTWIYLLKEKS 540


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/86 (55%), Positives = 62/86 (72%)
 Frame = +3

Query: 3   KTQMVRGMPTLDNKSQQCEACALGKLSRNSFPNNEAWRASRLLELIHTDVCGPMRTPSIG 182
           + +MVRG+P +++ +Q CE C LGK  + SFP   + RA + LELIHTDVCGP++  S+G
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSLG 544

Query: 183 RKRYILTFIDDFSRKAWVCFLHEKSE 260
           +  Y L FIDDFSRK WV FL EKSE
Sbjct: 545 KSNYFLLFIDDFSRKTWVYFLKEKSE 570


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  106 bits (264), Expect = 2e-21
 Identities = 48/86 (55%), Positives = 62/86 (72%)
 Frame = +3

Query: 3   KTQMVRGMPTLDNKSQQCEACALGKLSRNSFPNNEAWRASRLLELIHTDVCGPMRTPSIG 182
           + +MVRG+P +++ +Q CE C LGK  + SFP   + RA + LELIHTDVCGP++  S+G
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544

Query: 183 RKRYILTFIDDFSRKAWVCFLHEKSE 260
           +  Y L FIDDFSRK WV FL EKSE
Sbjct: 545 KSNYFLLFIDDFSRKTWVYFLKEKSE 570


>emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]
          Length = 808

 Score =  106 bits (264), Expect = 2e-21
 Identities = 45/83 (54%), Positives = 60/83 (72%)
 Frame = +3

Query: 12  MVRGMPTLDNKSQQCEACALGKLSRNSFPNNEAWRASRLLELIHTDVCGPMRTPSIGRKR 191
           MV G+P +   SQ CE C +GK  R  FP  ++W+A+++LEL+H+D+CGP+   S G KR
Sbjct: 1   MVTGLPPIQTPSQICEECVVGKQHRYQFPKGKSWKANKVLELVHSDICGPINPTSNGGKR 60

Query: 192 YILTFIDDFSRKAWVCFLHEKSE 260
           Y +TFIDD+SRK WV FL EKSE
Sbjct: 61  YFITFIDDYSRKTWVYFLQEKSE 83


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  106 bits (264), Expect = 2e-21
 Identities = 48/86 (55%), Positives = 62/86 (72%)
 Frame = +3

Query: 3   KTQMVRGMPTLDNKSQQCEACALGKLSRNSFPNNEAWRASRLLELIHTDVCGPMRTPSIG 182
           + +MVRG+P +++ +Q CE C LGK  + SFP   + RA + LELIHTDVCGP++  S+G
Sbjct: 485 RKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLG 544

Query: 183 RKRYILTFIDDFSRKAWVCFLHEKSE 260
           +  Y L FIDDFSRK WV FL EKSE
Sbjct: 545 KSNYFLLFIDDFSRKTWVYFLKEKSE 570


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