BLASTX nr result

ID: Atractylodes21_contig00052524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00052524
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]    96   2e-18
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...    94   2e-17
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]                94   2e-17
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...    94   2e-17
emb|CBI37296.3| unnamed protein product [Vitis vinifera]               91   8e-17

>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/94 (45%), Positives = 61/94 (64%)
 Frame = -3

Query: 284 RMFPVFSSHVPVDRKCLQVKEMPKSHIWHKRLAHVNYKAIRTMMYKKMVKGLPSVVEKYA 105
           RMF + +  +     C Q      +H+WH R  H+++K +RT+ YK+MV+GLP +     
Sbjct: 344 RMFILSARILSKAPTCFQTILEDNTHLWHCRYGHLSFKGLRTLQYKQMVRGLPQLKAPSK 403

Query: 104 VCETCMIGKQQRRAIPKKSNWRATQRLQLVHTDL 3
           +C  CM+GKQ R AIPK+S WRA+QRLQLVH D+
Sbjct: 404 ICTDCMVGKQHRDAIPKRSLWRASQRLQLVHADI 437


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis
           thaliana]
          Length = 1334

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/102 (48%), Positives = 71/102 (69%), Gaps = 6/102 (5%)
 Frame = -3

Query: 290 KNRMFPVFS----SHVPVDRKCLQVKEMPKSHIWHKRLAHVNYKAIRTMMYKKMVKGLPS 123
           KNRMF VF+    S    + +CLQV     +++WHKR  H+N++ +R++  K+MVKGLP 
Sbjct: 403 KNRMFVVFAAVKKSKETEETRCLQVIGKA-NNMWHKRFGHLNHQGLRSLAEKEMVKGLPK 461

Query: 122 --VVEKYAVCETCMIGKQQRRAIPKKSNWRATQRLQLVHTDL 3
             + E+ AVC+ C+ GKQ R +IPK+S W++TQ LQLVHTD+
Sbjct: 462 FDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDI 503


>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
          Length = 1207

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/102 (48%), Positives = 71/102 (69%), Gaps = 6/102 (5%)
 Frame = -3

Query: 290 KNRMFPVFS----SHVPVDRKCLQVKEMPKSHIWHKRLAHVNYKAIRTMMYKKMVKGLPS 123
           KNRMF VF+    S    + +CLQV     +++WHKR  H+N++ +R++  K+MVKGLP 
Sbjct: 308 KNRMFVVFAAVKKSKETEETRCLQVIGKA-NNMWHKRFGHLNHQGLRSLAEKEMVKGLPK 366

Query: 122 --VVEKYAVCETCMIGKQQRRAIPKKSNWRATQRLQLVHTDL 3
             + E+ AVC+ C+ GKQ R +IPK+S W++TQ LQLVHTD+
Sbjct: 367 FDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDI 408


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
           gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1334

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/102 (48%), Positives = 71/102 (69%), Gaps = 6/102 (5%)
 Frame = -3

Query: 290 KNRMFPVFS----SHVPVDRKCLQVKEMPKSHIWHKRLAHVNYKAIRTMMYKKMVKGLPS 123
           KNRMF VF+    S    + +CLQV     +++WHKR  H+N++ +R++  K+MVKGLP 
Sbjct: 403 KNRMFVVFAAVKKSKETEETRCLQVIGKA-NNMWHKRFGHLNHQGLRSLAEKEMVKGLPK 461

Query: 122 --VVEKYAVCETCMIGKQQRRAIPKKSNWRATQRLQLVHTDL 3
             + E+ AVC+ C+ GKQ R +IPK+S W++TQ LQLVHTD+
Sbjct: 462 FDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDI 503


>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 38/95 (40%), Positives = 58/95 (61%)
 Frame = -3

Query: 287 NRMFPVFSSHVPVDRKCLQVKEMPKSHIWHKRLAHVNYKAIRTMMYKKMVKGLPSVVEKY 108
           NRMF +++   P+   C          +WH R  H++++ ++T+  +KMV GLP      
Sbjct: 426 NRMFMLYALSQPISSTCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQPPS 485

Query: 107 AVCETCMIGKQQRRAIPKKSNWRATQRLQLVHTDL 3
            +C+ C++GKQ R +IPKKSNWRA + LQLVH D+
Sbjct: 486 KLCKDCLVGKQHRSSIPKKSNWRAAEILQLVHADI 520


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