BLASTX nr result

ID: Atractylodes21_contig00051918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051918
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi...   205   4e-51
ref|XP_002532248.1| pentatricopeptide repeat-containing protein,...   184   9e-45
ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containi...   167   6e-40

>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  205 bits (521), Expect = 4e-51
 Identities = 96/125 (76%), Positives = 117/125 (93%)
 Frame = -1

Query: 375 LHKLARSKKFEDVDSLLHQMTYETCKFHESIFLDLMTHFSRSSLHKRIVEMFNAIQPIVR 196
           LHKLA+SKKF+ +D++LHQMTYETCKFHE IFL+LM HFS+ SLH+R+VEMF+AI+PIVR
Sbjct: 100 LHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVR 159

Query: 195 EKPSLKAVSTCLNLLVESNQVDLARTFLVDTKKTLDLYPNTCIFNILVKHHCKHRNIESA 16
           EKPSLKA+STCLNLLVESNQVDL R FL+++KK+L+L PNTCIFNILVKHHCK+ +I+SA
Sbjct: 160 EKPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSA 219

Query: 15  FEVVK 1
           FEVV+
Sbjct: 220 FEVVE 224


>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  184 bits (466), Expect = 9e-45
 Identities = 87/124 (70%), Positives = 107/124 (86%)
 Frame = -1

Query: 375 LHKLARSKKFEDVDSLLHQMTYETCKFHESIFLDLMTHFSRSSLHKRIVEMFNAIQPIVR 196
           +HKLA++KKF  VD+LLHQMTYETCKFHE+IFL+LM HF +SSLH+R++EMF AIQPIVR
Sbjct: 99  IHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVR 158

Query: 195 EKPSLKAVSTCLNLLVESNQVDLARTFLVDTKKTLDLYPNTCIFNILVKHHCKHRNIESA 16
           EKPSLKA+STCLN+LVES Q+DLA+  L+   + L + PNTCIFNILVKHHCK  ++ESA
Sbjct: 159 EKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESA 218

Query: 15  FEVV 4
            EV+
Sbjct: 219 LEVM 222


>ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Cucumis sativus]
           gi|449497032|ref|XP_004160294.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g18475-like [Cucumis sativus]
          Length = 504

 Score =  179 bits (453), Expect = 3e-43
 Identities = 82/125 (65%), Positives = 108/125 (86%)
 Frame = -1

Query: 375 LHKLARSKKFEDVDSLLHQMTYETCKFHESIFLDLMTHFSRSSLHKRIVEMFNAIQPIVR 196
           +  LA+ KKF+ +D +LHQMTY+TCK HE IFL+LM HFS+SS+H+R+++MF AI+ IVR
Sbjct: 90  IQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVR 149

Query: 195 EKPSLKAVSTCLNLLVESNQVDLARTFLVDTKKTLDLYPNTCIFNILVKHHCKHRNIESA 16
           EKPSLKA+STCLNLLVES++VDLAR  LV+ +  L+L PNTCIFNILVKHHC++ ++++A
Sbjct: 150 EKPSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAA 209

Query: 15  FEVVK 1
           FEVVK
Sbjct: 210 FEVVK 214


>ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|222842808|gb|EEE80355.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  177 bits (450), Expect = 6e-43
 Identities = 87/125 (69%), Positives = 104/125 (83%)
 Frame = -1

Query: 375 LHKLARSKKFEDVDSLLHQMTYETCKFHESIFLDLMTHFSRSSLHKRIVEMFNAIQPIVR 196
           + KLAR+KKF+ VD+LL QM YETCKFHES+FL+LM +F++SS  +R+VEMFN IQPIVR
Sbjct: 90  IDKLARAKKFQAVDALLRQMMYETCKFHESLFLNLMKYFAKSSEFERVVEMFNKIQPIVR 149

Query: 195 EKPSLKAVSTCLNLLVESNQVDLARTFLVDTKKTLDLYPNTCIFNILVKHHCKHRNIESA 16
           EKPSLKA+STCLNLLVES QVDL R FL+D  K   L PNTCIFNI +K+HCK  ++ESA
Sbjct: 150 EKPSLKAISTCLNLLVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESA 209

Query: 15  FEVVK 1
           F VVK
Sbjct: 210 FAVVK 214


>ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Glycine max]
          Length = 546

 Score =  167 bits (424), Expect = 6e-40
 Identities = 78/125 (62%), Positives = 102/125 (81%)
 Frame = -1

Query: 375 LHKLARSKKFEDVDSLLHQMTYETCKFHESIFLDLMTHFSRSSLHKRIVEMFNAIQPIVR 196
           L KLAR   F  VD +LHQMTYETCKFHE IF++LM HFS+SSLH++++  + +IQPIVR
Sbjct: 133 LDKLARCNNFHAVDRVLHQMTYETCKFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVR 192

Query: 195 EKPSLKAVSTCLNLLVESNQVDLARTFLVDTKKTLDLYPNTCIFNILVKHHCKHRNIESA 16
           EKPS KA+STCLNLL++SN+VDLAR  L+  K+ L   PN C+FNILVK+HCK+ +++SA
Sbjct: 193 EKPSPKALSTCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSA 252

Query: 15  FEVVK 1
           FE+V+
Sbjct: 253 FEIVE 257


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