BLASTX nr result

ID: Atractylodes21_contig00051916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051916
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin...    89   5e-16
ref|XP_003554702.1| PREDICTED: zinc finger CCCH domain-containin...    85   5e-15
ref|XP_002324006.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containin...    82   6e-14
ref|XP_002300018.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14

>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Vitis vinifera]
          Length = 948

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/64 (68%), Positives = 52/64 (81%)
 Frame = -3

Query: 193 NSDSSLKLQSGNGRMLRKPSQKAQRTLFVNGFPRQNNIRESLLSHFKKFGEVIHIYIPLN 14
           N D S + QS   R +RKPSQKA RTLFVNG P++NN +E+LLSHF+KFGEVI IYIPLN
Sbjct: 466 NVDLSSRTQSDAMRNIRKPSQKALRTLFVNGIPQKNNRKEALLSHFRKFGEVIDIYIPLN 525

Query: 13  SQRA 2
           S+RA
Sbjct: 526 SERA 529


>ref|XP_003554702.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Glycine max]
          Length = 945

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/62 (67%), Positives = 52/62 (83%)
 Frame = -3

Query: 187 DSSLKLQSGNGRMLRKPSQKAQRTLFVNGFPRQNNIRESLLSHFKKFGEVIHIYIPLNSQ 8
           ++SLK Q+ + R +RK SQKA  TLFVNG P++NN RE+LL+HFKKFGEVI IYIPLNS+
Sbjct: 456 EASLKAQTDSMRNIRKSSQKALCTLFVNGIPQKNNKREALLAHFKKFGEVIDIYIPLNSE 515

Query: 7   RA 2
           RA
Sbjct: 516 RA 517


>ref|XP_002324006.1| predicted protein [Populus trichocarpa] gi|222867008|gb|EEF04139.1|
           predicted protein [Populus trichocarpa]
          Length = 964

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/62 (67%), Positives = 49/62 (79%)
 Frame = -3

Query: 187 DSSLKLQSGNGRMLRKPSQKAQRTLFVNGFPRQNNIRESLLSHFKKFGEVIHIYIPLNSQ 8
           DS  K QS   R   KPSQKA RTLFVNG P+++N RE+LLSHF+KFGEVI IYIPLN++
Sbjct: 457 DSPAKTQSNTMRHTPKPSQKALRTLFVNGIPQKSNKREALLSHFQKFGEVIDIYIPLNTE 516

Query: 7   RA 2
           RA
Sbjct: 517 RA 518


>ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Glycine max]
          Length = 922

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/62 (66%), Positives = 51/62 (82%)
 Frame = -3

Query: 187 DSSLKLQSGNGRMLRKPSQKAQRTLFVNGFPRQNNIRESLLSHFKKFGEVIHIYIPLNSQ 8
           ++SLK Q+ + R +RK SQKA  TLFVNG P++ N RE+LL+HFKKFGEVI IYIPLNS+
Sbjct: 456 EASLKAQTDSMRNIRKSSQKAFCTLFVNGIPQKYNKREALLAHFKKFGEVIDIYIPLNSE 515

Query: 7   RA 2
           RA
Sbjct: 516 RA 517


>ref|XP_002300018.1| predicted protein [Populus trichocarpa] gi|222847276|gb|EEE84823.1|
           predicted protein [Populus trichocarpa]
          Length = 981

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/62 (66%), Positives = 48/62 (77%)
 Frame = -3

Query: 187 DSSLKLQSGNGRMLRKPSQKAQRTLFVNGFPRQNNIRESLLSHFKKFGEVIHIYIPLNSQ 8
           DS  K+ S   R  RK SQKA RTLFVNG P ++N R++LLSHF+KFGEVI IYIPLNS+
Sbjct: 466 DSPAKIHSDTMRHTRKLSQKALRTLFVNGIPHKSNKRDALLSHFQKFGEVIDIYIPLNSE 525

Query: 7   RA 2
           RA
Sbjct: 526 RA 527


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