BLASTX nr result

ID: Atractylodes21_contig00051756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051756
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316112.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
dbj|BAG80685.1| ribosomal protein L32 [Populus alba]                  138   5e-31
ref|XP_002888721.1| predicted protein [Arabidopsis lyrata subsp....   135   3e-30
gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]              130   1e-28
gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]       127   9e-28

>ref|XP_002316112.1| predicted protein [Populus trichocarpa]
           gi|224112197|ref|XP_002316116.1| predicted protein
           [Populus trichocarpa] gi|222865152|gb|EEF02283.1|
           predicted protein [Populus trichocarpa]
           gi|222865156|gb|EEF02287.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/133 (53%), Positives = 90/133 (67%), Gaps = 6/133 (4%)
 Frame = +2

Query: 17  RMAFLRTSLESNVCRALTFKRCTHGITRSPLLDSSISQSAASPPLLLPEFERSVDTIDNR 196
           R+  L+ + E+N    L  ++ TH +  +P LD ++  S ASP   LPEF+ + DT +N 
Sbjct: 4   RLGMLKCAAEANNGCRLGIRKWTHVVAMAPPLDGALESSIASPQFTLPEFDANQDTSNN- 62

Query: 197 FASDFHINT------GSMELMAVPKKKTSPHKRGIRNGPKALKPIPVIIRCKVCGRVKLP 358
            +SDF          GSMELMAVPK+K +PHKRGIRNGPKALKP PVIIRCK CG+VKLP
Sbjct: 63  -SSDFGFTFPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPTPVIIRCKSCGQVKLP 121

Query: 359 HFFCCSGLRDPDG 397
           HF+CCSG R  +G
Sbjct: 122 HFYCCSGDRGKNG 134


>dbj|BAG80685.1| ribosomal protein L32 [Populus alba]
          Length = 138

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/133 (53%), Positives = 89/133 (66%), Gaps = 6/133 (4%)
 Frame = +2

Query: 17  RMAFLRTSLESNVCRALTFKRCTHGITRSPLLDSSISQSAASPPLLLPEFERSVDTIDNR 196
           R+  L+ + E N    L  ++ TH +  +P LD ++  S A+P   LPEF+ + DT  N 
Sbjct: 4   RLGMLKCAAEGNNGCRLGIRKWTHVVAMAPPLDGALESSIAAPQFTLPEFDANQDTSKN- 62

Query: 197 FASDFHINT------GSMELMAVPKKKTSPHKRGIRNGPKALKPIPVIIRCKVCGRVKLP 358
            +SDF          GSMELMAVPK+K +PHKRGIRNGPKALKPIPVIIRCK CG+VKLP
Sbjct: 63  -SSDFGFTFPGFSFGGSMELMAVPKRKVTPHKRGIRNGPKALKPIPVIIRCKSCGQVKLP 121

Query: 359 HFFCCSGLRDPDG 397
           HF+CCSG R  +G
Sbjct: 122 HFYCCSGDRGKNG 134


>ref|XP_002888721.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334562|gb|EFH64980.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 141

 Score =  135 bits (340), Expect = 3e-30
 Identities = 75/132 (56%), Positives = 85/132 (64%), Gaps = 5/132 (3%)
 Frame = +2

Query: 5   MAFSRMAFLRTSLESNVCRALTFKRCTHGITRSPLLDSSISQSAASPPLLLPEF-----E 169
           MA       R  +ES   R L F+   H  T SP L+ +I  S ASPPL+LPEF     +
Sbjct: 1   MALRLTTLKRAVVESR--RILEFRSFNHVSTISPPLNGAIDLSTASPPLVLPEFYQDLSD 58

Query: 170 RSVDTIDNRFASDFHINTGSMELMAVPKKKTSPHKRGIRNGPKALKPIPVIIRCKVCGRV 349
            S+D  + RF        GSMELMAVPKKK S HKRGIRNGPKALKP PVIIRC+ CGRV
Sbjct: 59  SSIDDKNFRFCFPISFFGGSMELMAVPKKKISKHKRGIRNGPKALKPTPVIIRCRSCGRV 118

Query: 350 KLPHFFCCSGLR 385
           KLPHF+CCSG R
Sbjct: 119 KLPHFYCCSGER 130


>gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]
          Length = 132

 Score =  130 bits (327), Expect = 1e-28
 Identities = 71/115 (61%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
 Frame = +2

Query: 74  KRCTHGITRSPLLDSSISQ-SAASPPLLLPEFERSVDTIDNRFASDFHINTGSMELMAVP 250
           +R  H  +R   LDS + + +A SP L+LPE E + +   N   S F  N GSMELMAVP
Sbjct: 22  RRFIHITSRPAPLDSVVDRLTATSPSLVLPENENNSNMFPN---SPF--NWGSMELMAVP 76

Query: 251 KKKTSPHKRGIRNGPKALKPIPVIIRCKVCGRVKLPHFFCCSGLR-DPDGPNGST 412
           KKK SPHKRGIRNGPKALKP+PVIIRCK CGRVKLPHFFCCSG++ +P   N ST
Sbjct: 77  KKKVSPHKRGIRNGPKALKPVPVIIRCKACGRVKLPHFFCCSGIKQNPGEENNST 131


>gb|ADR71288.1| 50S ribosomal protein L32pA [Hevea brasiliensis]
          Length = 139

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/133 (47%), Positives = 87/133 (65%), Gaps = 6/133 (4%)
 Frame = +2

Query: 17  RMAFLRTSLESNVCRALTFKRCTHGITRSPLLDSSISQSAASPPLLLPEFERSVDTIDNR 196
           R+  L+T++    C  L+  R  H  +    LD S+ ++ A P ++LPEF+ + D +++ 
Sbjct: 4   RIGMLKTAVGKYGC-TLSLLRWAHIASMPSPLDGSLQRTTAPPDMVLPEFDTNPDNVNSS 62

Query: 197 FASDFHINT------GSMELMAVPKKKTSPHKRGIRNGPKALKPIPVIIRCKVCGRVKLP 358
           + ++           GS+E+MAVPKKK SPHKRGIRNGPKALKP PVIIRC+ CGR+KLP
Sbjct: 63  YRNNLEFGFPSFSFGGSIEVMAVPKKKVSPHKRGIRNGPKALKPTPVIIRCRSCGRIKLP 122

Query: 359 HFFCCSGLRDPDG 397
           HF+CCSG R   G
Sbjct: 123 HFYCCSGDRGKAG 135


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