BLASTX nr result

ID: Atractylodes21_contig00051655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051655
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002453725.1| hypothetical protein SORBIDRAFT_04g011300 [S...    99   4e-19
ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...    99   5e-19
gb|AAT39314.2| Transposase, putative [Solanum demissum]                98   6e-19
gb|AAT38794.1| Putative hAT family dimerisation domain containin...    98   6e-19

>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score =  120 bits (300), Expect = 1e-25
 Identities = 54/100 (54%), Positives = 78/100 (78%)
 Frame = +2

Query: 2   LVKVCKHQLQTMKVSGWESLLNQVSLFCEKHDVDVCNMEEMFLLPGRSRRKAPQMTNLHY 181
           L+   K + + M+ + WESLL +VS FC KHD+D+ NM++ + L GRSRRK+  +TNLH+
Sbjct: 544 LLNTSKERFKMMRENDWESLLEEVSSFCIKHDIDILNMDDEYKLRGRSRRKSQGITNLHH 603

Query: 182 YRVDLFYVVIDLQLIELENRFSETSTDLLLSIACLNPNDS 301
           +R +LF  +ID+QL EL++RF+ETST+LLL +ACLNP+DS
Sbjct: 604 FRYELFNNIIDMQLTELDDRFTETSTELLLCVACLNPSDS 643


>ref|XP_002453725.1| hypothetical protein SORBIDRAFT_04g011300 [Sorghum bicolor]
           gi|241933556|gb|EES06701.1| hypothetical protein
           SORBIDRAFT_04g011300 [Sorghum bicolor]
          Length = 448

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/100 (46%), Positives = 70/100 (70%)
 Frame = +2

Query: 2   LVKVCKHQLQTMKVSGWESLLNQVSLFCEKHDVDVCNMEEMFLLPGRSRRKAPQMTNLHY 181
           L+   K  LQ M+ +GWE LL +V  FCEK++++V +M++   + G SRR+  ++TN+HY
Sbjct: 199 LISDVKDSLQDMRENGWEPLLKRVITFCEKNEIEVPDMDKEINVRGTSRRRKQKVTNMHY 258

Query: 182 YRVDLFYVVIDLQLIELENRFSETSTDLLLSIACLNPNDS 301
           Y V+LF V ID  L E+ +RFSETS++LL+ +A  NP +S
Sbjct: 259 YHVELFLVAIDALLTEMNHRFSETSSELLVCMAAFNPRNS 298


>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/102 (46%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
 Frame = +2

Query: 2   LVKVCKHQLQTMKVSGWESLLNQVSLFCEKHDVDVCNMEEMFLLPGRSRR--KAPQMTNL 175
           LV + K +LQ ++  GWE LL +V LFC KHD+++ +M+++F   G+S+R   A  +T  
Sbjct: 647 LVSITKERLQALRDDGWEPLLEEVILFCNKHDINIPSMDDIFFR-GKSKRGGNAESITIG 705

Query: 176 HYYRVDLFYVVIDLQLIELENRFSETSTDLLLSIACLNPNDS 301
           ++YR++LFY V+D+QL EL NRF+ET++ LL+ + CL PN+S
Sbjct: 706 NHYRIELFYTVVDMQLQELNNRFNETNSRLLICMECLCPNNS 747


>gb|AAT39314.2| Transposase, putative [Solanum demissum]
          Length = 812

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/97 (50%), Positives = 67/97 (69%)
 Frame = +2

Query: 2   LVKVCKHQLQTMKVSGWESLLNQVSLFCEKHDVDVCNMEEMFLLPGRSRRKAPQMTNLHY 181
           LV+V K +LQ ++   W+SL+ +VS FC KH++ + N EE ++   RSRRK    T LH+
Sbjct: 567 LVEVAKRRLQVLRDDEWDSLIAKVSTFCIKHNILIPNFEEPYVSSLRSRRKLANYTILHH 626

Query: 182 YRVDLFYVVIDLQLIELENRFSETSTDLLLSIACLNP 292
           YRV++F  +ID QL EL +RF E +TDLL  IACLNP
Sbjct: 627 YRVEVFCNIIDWQLQELNDRFDEVTTDLLHGIACLNP 663


>gb|AAT38794.1| Putative hAT family dimerisation domain containing protein,
           identical [Solanum demissum]
          Length = 805

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/97 (50%), Positives = 67/97 (69%)
 Frame = +2

Query: 2   LVKVCKHQLQTMKVSGWESLLNQVSLFCEKHDVDVCNMEEMFLLPGRSRRKAPQMTNLHY 181
           LV+V K +LQ ++   W+SL+ +VS FC KH++ + N EE ++   RSRRK    T LH+
Sbjct: 560 LVEVAKRRLQVLRDDEWDSLIAKVSTFCIKHNILIPNFEEPYVSSLRSRRKLANYTILHH 619

Query: 182 YRVDLFYVVIDLQLIELENRFSETSTDLLLSIACLNP 292
           YRV++F  +ID QL EL +RF E +TDLL  IACLNP
Sbjct: 620 YRVEVFCNIIDWQLQELNDRFDEVTTDLLHGIACLNP 656


Top