BLASTX nr result

ID: Atractylodes21_contig00051587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00051587
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   152   2e-35
ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|XP_002888819.1| pentatricopeptide repeat-containing protein ...   147   7e-34
ref|NP_177262.1| pentatricopeptide repeat-containing protein [Ar...   145   3e-33

>ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial [Vitis vinifera]
          Length = 531

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/120 (63%), Positives = 97/120 (80%)
 Frame = -1

Query: 360 KLCKMISNHRDTSQLESLLNSTQIELSPALVVEILKKLSNAGVFALSFFRWAEKQNGFKH 181
           KLCK++  H ++S +ESLLN   +++SP LV+E+LKKLSN+GV ALSFFRWAEKQ GFK+
Sbjct: 85  KLCKLLCTHSNSS-IESLLNGASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKY 143

Query: 180 TSDSYDALIEALGKIKQFKVIWTLVNDMKSKGVLGKGTFALISRRYARXXXXXXXXXAFE 1
           ++++Y+ALIEALGKIKQFK+IW LVNDM+SKG+L + TFALISRRYAR          FE
Sbjct: 144 STENYNALIEALGKIKQFKMIWNLVNDMRSKGLLTQETFALISRRYARARKVKEAVETFE 203


>ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71060, mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  152 bits (385), Expect = 2e-35
 Identities = 78/120 (65%), Positives = 94/120 (78%)
 Frame = -1

Query: 360 KLCKMISNHRDTSQLESLLNSTQIELSPALVVEILKKLSNAGVFALSFFRWAEKQNGFKH 181
           K CK+IS + + S +ESLL+   +ELSPAL+VE+LKKLSNAG  ALSFFRWAEKQ GFKH
Sbjct: 96  KFCKLISKNPN-SCIESLLDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKH 154

Query: 180 TSDSYDALIEALGKIKQFKVIWTLVNDMKSKGVLGKGTFALISRRYARXXXXXXXXXAFE 1
           T++SY+ LIEALGKIKQF VIW LV+DMK KG+L + TFALI+RRYAR         +FE
Sbjct: 155 TTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFE 214


>ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  152 bits (385), Expect = 2e-35
 Identities = 78/120 (65%), Positives = 94/120 (78%)
 Frame = -1

Query: 360 KLCKMISNHRDTSQLESLLNSTQIELSPALVVEILKKLSNAGVFALSFFRWAEKQNGFKH 181
           K CK+IS + + S +ESLL+   +ELSPAL+VE+LKKLSNAG  ALSFFRWAEKQ GFKH
Sbjct: 96  KFCKLISKNPN-SCIESLLDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKH 154

Query: 180 TSDSYDALIEALGKIKQFKVIWTLVNDMKSKGVLGKGTFALISRRYARXXXXXXXXXAFE 1
           T++SY+ LIEALGKIKQF VIW LV+DMK KG+L + TFALI+RRYAR         +FE
Sbjct: 155 TTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFE 214


>ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334660|gb|EFH65078.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 512

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/108 (66%), Positives = 90/108 (83%)
 Frame = -1

Query: 360 KLCKMISNHRDTSQLESLLNSTQIELSPALVVEILKKLSNAGVFALSFFRWAEKQNGFKH 181
           K+CK++S   D S++E+LLN   ++LSPAL+ E+LKKLSNAGV ALS F+WAE Q GFKH
Sbjct: 70  KICKILSKFTD-SKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKH 128

Query: 180 TSDSYDALIEALGKIKQFKVIWTLVNDMKSKGVLGKGTFALISRRYAR 37
           T+ +Y+ALIE+LGKIKQFK+IW LV+DMK K +L K TFALISRRYAR
Sbjct: 129 TTSNYNALIESLGKIKQFKLIWNLVDDMKQKKLLSKDTFALISRRYAR 176


>ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g71060, mitochondrial; Flags: Precursor
           gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical
           protein; 31939-30407 [Arabidopsis thaliana]
           gi|332197036|gb|AEE35157.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 510

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/108 (64%), Positives = 92/108 (85%)
 Frame = -1

Query: 360 KLCKMISNHRDTSQLESLLNSTQIELSPALVVEILKKLSNAGVFALSFFRWAEKQNGFKH 181
           ++CK+++   D S++E+LLN   ++LSPAL+ E+LKKLSNAGV ALS F+WAE Q GFKH
Sbjct: 68  RICKILTKFTD-SKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKH 126

Query: 180 TSDSYDALIEALGKIKQFKVIWTLVNDMKSKGVLGKGTFALISRRYAR 37
           T+ +Y+ALIE+LGKIKQFK+IW+LV+DMK+K +L K TFALISRRYAR
Sbjct: 127 TTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYAR 174


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