BLASTX nr result

ID: Atractylodes21_contig00050291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00050291
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   154   7e-36
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...   151   5e-35
ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 ...   147   9e-34
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
ref|XP_003626059.1| Condensin-2 complex subunit D3 [Medicago tru...   144   6e-33

>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  154 bits (389), Expect = 7e-36
 Identities = 86/143 (60%), Positives = 107/143 (74%), Gaps = 22/143 (15%)
 Frame = -3

Query: 368  LKHLLESKNSPLSGSLMECLRILLKDYKNEIDEILVADKQLQKELIYDIQKYESLKAKST 189
            LK LLE+KNSPL GSLMECLRI+LKDYKNEID+ILVADKQLQKELIYDIQKYE+ KAK+T
Sbjct: 1152 LKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADKQLQKELIYDIQKYEAAKAKAT 1211

Query: 188  AAEAVG-KGVNGNSVLAH---------------------TNSKVSSAVAGALAEATAKSV 75
             AEAVG K  +G++ LA                      ++S+V+SA+A   A ATA+SV
Sbjct: 1212 VAEAVGTKPKSGSNQLADVSKNLTKTQEQTVGQSSNELPSDSRVASAIADTAAAATARSV 1271

Query: 74   LRDVNQGAGTPLLSAMNVPKLKS 6
            LR++N+G GTP LS+++VPK+KS
Sbjct: 1272 LREINKGTGTPPLSSLSVPKVKS 1294


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score =  151 bits (382), Expect = 5e-35
 Identities = 86/143 (60%), Positives = 104/143 (72%), Gaps = 22/143 (15%)
 Frame = -3

Query: 368  LKHLLESKNSPLSGSLMECLRILLKDYKNEIDEILVADKQLQKELIYDIQKYESLKAKST 189
            LK LLE+KNSPL GSLMECLRI+LKDYKNEID+ILVADKQLQKELIYDI+KYE+ KAK+T
Sbjct: 1162 LKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADKQLQKELIYDIKKYEAAKAKAT 1221

Query: 188  AAEAVG---KGVNGNSVLAHTN-------------------SKVSSAVAGALAEATAKSV 75
             AEAVG   K V+  S  A  N                   S+V+SA+A A A ATA+SV
Sbjct: 1222 VAEAVGTKPKSVSNQSPDASKNLTKTQGQTVGQSSNELPSDSRVASAMANAAAAATARSV 1281

Query: 74   LRDVNQGAGTPLLSAMNVPKLKS 6
            LR++N+G  TP LS+++VPK+KS
Sbjct: 1282 LREINKGTATPSLSSLSVPKVKS 1304


>ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 complex subunit D3-like,
            partial [Cucumis sativus]
          Length = 929

 Score =  147 bits (371), Expect = 9e-34
 Identities = 81/139 (58%), Positives = 98/139 (70%), Gaps = 18/139 (12%)
 Frame = -3

Query: 368  LKHLLESKNSPLSGSLMECLRILLKDYKNEIDEILVADKQLQKELIYDIQKYESLKAKST 189
            LK L+ESKNSPL GSLMECLR+LLKDYKNEID++LVADKQLQKE +YDIQ+YES KAKS 
Sbjct: 760  LKRLMESKNSPLIGSLMECLRVLLKDYKNEIDDLLVADKQLQKESLYDIQRYESTKAKSA 819

Query: 188  AAEAVGKGVNGNSVLA------------------HTNSKVSSAVAGALAEATAKSVLRDV 63
             AEAV +     + L+                    +SKV+SA+A A A ATAKSVLR+V
Sbjct: 820  VAEAVNEMQKSTNYLSPEAPPQAVSVLNNLTSKLQNDSKVASAIADAAAAATAKSVLREV 879

Query: 62   NQGAGTPLLSAMNVPKLKS 6
            N+G  TP L + ++PKLKS
Sbjct: 880  NRGTSTPPLGSRSLPKLKS 898


>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  147 bits (371), Expect = 9e-34
 Identities = 83/140 (59%), Positives = 101/140 (72%), Gaps = 20/140 (14%)
 Frame = -3

Query: 368  LKHLLESKNSPLSGSLMECLRILLKDYKNEIDEILVADKQLQKELIYDIQKYESLKAKST 189
            LK LLESKNSPL+GSLMECLRI+LKDYKNEIDEILVADKQLQKELIYD+QKYE+ KAKS 
Sbjct: 1101 LKRLLESKNSPLTGSLMECLRIILKDYKNEIDEILVADKQLQKELIYDMQKYETSKAKSA 1160

Query: 188  AAEAVGKGVNGNSVLA--------------------HTNSKVSSAVAGALAEATAKSVLR 69
            AA  V    N +S L+                     ++S+V+SA+A A+AEA  +SVLR
Sbjct: 1161 AAVVVASMQNHSSFLSPGASKTAGGTKAQDNLNENPQSDSRVASAMANAVAEARVRSVLR 1220

Query: 68   DVNQGAGTPLLSAMNVPKLK 9
            +VN+G  TP LS+++ PKLK
Sbjct: 1221 EVNRGIATPPLSSISRPKLK 1240


>ref|XP_003626059.1| Condensin-2 complex subunit D3 [Medicago truncatula]
            gi|355501074|gb|AES82277.1| Condensin-2 complex subunit
            D3 [Medicago truncatula]
          Length = 854

 Score =  144 bits (364), Expect = 6e-33
 Identities = 78/145 (53%), Positives = 103/145 (71%), Gaps = 24/145 (16%)
 Frame = -3

Query: 368  LKHLLESKNSPLSGSLMECLRILLKDYKNEIDEILVADKQLQKELIYDIQKYESLKAKST 189
            LK LLE+KNSPL GSLMECLR+LLKDYKNEID+ILVADKQLQKELIYD+QKYE+ KAK+T
Sbjct: 686  LKCLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKYEAAKAKAT 745

Query: 188  AAEAVG------------------------KGVNGNSVLAHTNSKVSSAVAGALAEATAK 81
             AEA+                         +  N +S +  + S+++SA+A A A +TA+
Sbjct: 746  VAEAIAAKPKSGANQSPDVSKNLTKEHGQTQVQNVDSDMLPSGSRIASAMADAAAASTAR 805

Query: 80   SVLRDVNQGAGTPLLSAMNVPKLKS 6
            SVL+++N+G  TP LS++N+PK+KS
Sbjct: 806  SVLKEINKGTATPQLSSLNIPKVKS 830


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