BLASTX nr result

ID: Atractylodes21_contig00049993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049993
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ...    69   4e-10
ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
emb|CBI40063.3| unnamed protein product [Vitis vinifera]               55   5e-06
ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote...    55   5e-06

>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
           gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
           protein, putative [Ricinus communis]
          Length = 781

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/74 (50%), Positives = 48/74 (64%)
 Frame = -2

Query: 223 LSVSIDVTPRSKAPIVSGEHRSDHVALYTPASKEPVKAQRKHKCVYDDDKIVVPNCVFKG 44
           LSV++D TPR + P  SG    +   + TPA+KE  +  RK KCV+ DD IV PN V K 
Sbjct: 407 LSVTLDTTPRPRFPNASGAMTPEISVIPTPAAKEGARVPRKRKCVF-DDTIVFPNNVIKQ 465

Query: 43  WLADASDLVSKRRK 2
            + D+SDLVSKR+K
Sbjct: 466 CIEDSSDLVSKRKK 479


>ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|222874175|gb|EEF11306.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/74 (45%), Positives = 47/74 (63%)
 Frame = -2

Query: 223 LSVSIDVTPRSKAPIVSGEHRSDHVALYTPASKEPVKAQRKHKCVYDDDKIVVPNCVFKG 44
           L + +D TP+SK   VSG +  + + + TPA+KE  +A RK KC + DD +V PN V K 
Sbjct: 350 LYIKLDATPQSKFKDVSGANTPEFMVISTPAAKEHARALRKRKCFF-DDVVVFPNNVIKE 408

Query: 43  WLADASDLVSKRRK 2
            + +  DLVSKRRK
Sbjct: 409 CIENTGDLVSKRRK 422


>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/83 (33%), Positives = 48/83 (57%)
 Frame = -2

Query: 250 LKPSPHRRQLSVSIDVTPRSKAPIVSGEHRSDHVALYTPASKEPVKAQRKHKCVYDDDKI 71
           L+ +    +++ ++D TP S  P  SG    + + ++TP  KE  +  RK KC++ D+KI
Sbjct: 311 LQVTAEGHRVTNTLDATPESNLPDASGSTTPEFIIVHTPTKKEHARIPRKRKCLF-DEKI 369

Query: 70  VVPNCVFKGWLADASDLVSKRRK 2
           V+ +   K  +  +SDL+ KRRK
Sbjct: 370 VLSSEFLKKSIQSSSDLIRKRRK 392


>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
           vinifera]
          Length = 756

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/83 (33%), Positives = 48/83 (57%)
 Frame = -2

Query: 250 LKPSPHRRQLSVSIDVTPRSKAPIVSGEHRSDHVALYTPASKEPVKAQRKHKCVYDDDKI 71
           L+ +    +++ ++D TP S  P  SG    + + ++TP  KE  +  RK KC++ D+KI
Sbjct: 446 LQVTAEGHRVTNTLDATPESNLPDASGSTTPEFIIVHTPTKKEHARIPRKRKCLF-DEKI 504

Query: 70  VVPNCVFKGWLADASDLVSKRRK 2
           V+ +   K  +  +SDL+ KRRK
Sbjct: 505 VLSSEFLKKSIQSSSDLIRKRRK 527


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