BLASTX nr result

ID: Atractylodes21_contig00049936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049936
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ...   120   1e-25
ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR...   111   5e-23
ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   111   5e-23
ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   104   6e-21

>ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 421

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/91 (62%), Positives = 66/91 (72%)
 Frame = +1

Query: 4   GPIHRFSLSTAYLQNSRYVDQWLLFLSRKDVKXXXXXXXXXXWFRAPSCLFSYKKLVRLE 183
           GPIH+F LST+YLQ    +DQWLLFLSR D+K          WFR PSCLF+ KKL RLE
Sbjct: 83  GPIHKFQLSTSYLQCCPDIDQWLLFLSRSDIKELVLELGEGEWFRVPSCLFNCKKLTRLE 142

Query: 184 LVRCELDPPLSFKGFVWLKYLNLQQVLIAPD 276
           L RCE DPP +FKGF+ LK LNL QVL+AP+
Sbjct: 143 LTRCEFDPPPNFKGFLCLKSLNLYQVLVAPE 173


>ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/91 (58%), Positives = 65/91 (71%)
 Frame = +1

Query: 4   GPIHRFSLSTAYLQNSRYVDQWLLFLSRKDVKXXXXXXXXXXWFRAPSCLFSYKKLVRLE 183
           GPIH+F LST+YLQ    +DQW+LFLSR D+K          WFR PSCLF+ KKL  LE
Sbjct: 83  GPIHKFQLSTSYLQCCPDIDQWILFLSRSDIKELVLELGEGEWFRVPSCLFNCKKLTCLE 142

Query: 184 LVRCELDPPLSFKGFVWLKYLNLQQVLIAPD 276
           L RCE DPP +FKGF+ L+ L+L QVL+AP+
Sbjct: 143 LFRCEFDPPPTFKGFLCLRSLSLHQVLVAPE 173


>ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein
           At1g13570-like [Cucumis sativus]
          Length = 418

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/92 (58%), Positives = 64/92 (69%)
 Frame = +1

Query: 1   DGPIHRFSLSTAYLQNSRYVDQWLLFLSRKDVKXXXXXXXXXXWFRAPSCLFSYKKLVRL 180
           +GPIH+F LS  YLQN+  +DQWLLFLSRK ++          WFR  SCLF+  KL  L
Sbjct: 80  EGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIELGDGEWFRVHSCLFNCSKLTLL 139

Query: 181 ELVRCELDPPLSFKGFVWLKYLNLQQVLIAPD 276
           EL RCELDPP +FKGF+ LK L L QVLIAP+
Sbjct: 140 ELYRCELDPPPTFKGFLCLKSLKLHQVLIAPE 171


>ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis
           sativus]
          Length = 418

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/92 (58%), Positives = 64/92 (69%)
 Frame = +1

Query: 1   DGPIHRFSLSTAYLQNSRYVDQWLLFLSRKDVKXXXXXXXXXXWFRAPSCLFSYKKLVRL 180
           +GPIH+F LS  YLQN+  +DQWLLFLSRK ++          WFR  SCLF+  KL  L
Sbjct: 80  EGPIHKFHLSATYLQNTPDLDQWLLFLSRKGIRELIIELGDGEWFRVHSCLFNCSKLTLL 139

Query: 181 ELVRCELDPPLSFKGFVWLKYLNLQQVLIAPD 276
           EL RCELDPP +FKGF+ LK L L QVLIAP+
Sbjct: 140 ELYRCELDPPPTFKGFLCLKSLKLHQVLIAPE 171


>ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 414

 Score =  104 bits (260), Expect = 6e-21
 Identities = 51/88 (57%), Positives = 61/88 (69%)
 Frame = +1

Query: 4   GPIHRFSLSTAYLQNSRYVDQWLLFLSRKDVKXXXXXXXXXXWFRAPSCLFSYKKLVRLE 183
           GPIH+F ++T+ L+    +DQW+LFLSR DVK          WF  PSCLFS +KL RLE
Sbjct: 76  GPIHKFQITTSNLRICPDIDQWILFLSRNDVKEILLELGECEWFTVPSCLFSCQKLTRLE 135

Query: 184 LVRCELDPPLSFKGFVWLKYLNLQQVLI 267
           LVRCEL PP +FKGF+ LK LNL QV I
Sbjct: 136 LVRCELHPPPTFKGFLHLKILNLHQVSI 163


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