BLASTX nr result

ID: Atractylodes21_contig00049872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049872
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330005.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002330004.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002523481.1| TMV resistance protein N, putative [Ricinus ...    71   1e-10
ref|XP_002270337.1| PREDICTED: TMV resistance protein N-like [Vi...    69   4e-10
gb|AAV88086.1| disease resistance-like protein 9, partial [Brass...    69   5e-10

>ref|XP_002330005.1| predicted protein [Populus trichocarpa] gi|222871430|gb|EEF08561.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 10/88 (11%)
 Frame = +1

Query: 4   SENYAFSKRCLDELVLIIESRRRIGQFVLPVFYHLNPSEILKQ----------HEEFRAE 153
           S++YA S RCLDELV+I+++RR  G  VLP+FYHL+PSE+  Q          HE+    
Sbjct: 82  SKDYASSTRCLDELVMIMDARRATGHIVLPIFYHLDPSEVRSQEGRCFEAFSTHEKSFQG 141

Query: 154 FDGRRHEWRSALGEVAKMASEYGMILHN 237
             GR  EWR+AL E A +A   GM+L +
Sbjct: 142 EKGRVEEWRAALREAADVA---GMVLQD 166


>ref|XP_002330004.1| predicted protein [Populus trichocarpa] gi|222871429|gb|EEF08560.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 10/88 (11%)
 Frame = +1

Query: 4   SENYAFSKRCLDELVLIIESRRRIGQFVLPVFYHLNPSEILKQ----------HEEFRAE 153
           S++YA S RCLDELV+I+++RR  G  VLP+FYHL+PSE+  Q          HE+    
Sbjct: 61  SKDYASSTRCLDELVMIMDARRATGHIVLPIFYHLDPSEVRSQEGRCFEAFSTHEKSFQG 120

Query: 154 FDGRRHEWRSALGEVAKMASEYGMILHN 237
             GR  EWR+AL E A +A   GM+L +
Sbjct: 121 EKGRVEEWRAALREAADVA---GMVLQD 145


>ref|XP_002523481.1| TMV resistance protein N, putative [Ricinus communis]
           gi|223537309|gb|EEF38940.1| TMV resistance protein N,
           putative [Ricinus communis]
          Length = 944

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 10/79 (12%)
 Frame = +1

Query: 4   SENYAFSKRCLDELVLIIESRRRIGQFVLPVFYHLNPSEILKQ----------HEEFRAE 153
           SENYAFS  CLDELV I+E ++ +GQ VLPVFYH++PS++ +Q          HE+   E
Sbjct: 77  SENYAFSPWCLDELVKILECKKTVGQIVLPVFYHVDPSDVAEQKGGFGAAFIEHEKCFKE 136

Query: 154 FDGRRHEWRSALGEVAKMA 210
              +  +WR+AL E A ++
Sbjct: 137 RIDKLQKWRAALTEAANIS 155


>ref|XP_002270337.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1256

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
 Frame = +1

Query: 4   SENYAFSKRCLDELVLIIESRRRIGQFVLPVFYHLNPSEILKQHEEFRAEFDGRRH---- 171
           SENYA S+ CLDELV I+E ++ +G  V+P+FYH++PS + KQ   F A F G       
Sbjct: 84  SENYAHSRSCLDELVKIMECQKDLGHTVIPIFYHVDPSHVRKQEGSFGAAFAGYEENWKD 143

Query: 172 ---EWRSALGEVAKMA 210
               WR+AL E A ++
Sbjct: 144 KIPRWRTALTEAANLS 159


>gb|AAV88086.1| disease resistance-like protein 9, partial [Brassica rapa subsp.
           campestris]
          Length = 284

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 8/81 (9%)
 Frame = +1

Query: 1   LSENYAFSKRCLDELVLIIESRRRIGQFVLPVFYHLNPSEILKQHEEFRAEF----DGRR 168
           LS+NYA S  CL+ELV I + RR  GQ V+PVFY ++PS++ KQ  EF   F    +G++
Sbjct: 55  LSKNYASSTWCLNELVEITKCRREFGQTVMPVFYEVDPSDVKKQSGEFGKVFQDICNGKK 114

Query: 169 HE----WRSALGEVAKMASEY 219
            E    WR AL EVA +A E+
Sbjct: 115 EEDTRTWREALVEVATIAGEH 135


Top