BLASTX nr result
ID: Atractylodes21_contig00049815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00049815
(553 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_068729.1| putative reverse transcriptase [Soybean chlorot... 80 3e-25
ref|NP_042513.1| reverse transcriptase [Peanut chlorotic streak ... 69 6e-20
ref|NP_861410.1| putative multifunctional pol protein [Cestrum y... 54 3e-19
gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus] 45 3e-12
gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus] 46 4e-12
>ref|NP_068729.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
gi|18266821|sp|P15629.2|POL_SOCMV RecName:
Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase gi|11322953|emb|CAC16945.1| putative
reverse transcriptase [Soybean chlorotic mottle virus]
Length = 692
Score = 79.7 bits (195), Expect(2) = 3e-25
Identities = 44/103 (42%), Positives = 68/103 (66%), Gaps = 6/103 (5%)
Frame = +1
Query: 262 IAPRVYQHD*GIDLVIGNDFLKLYQAFVQTNDAI-----SLDHPKKGK-ITTPILKPREL 423
+ P +Y HD G+DL+IGN+FLKLYQ F+Q + I +L++PK+ + I+T IL E+
Sbjct: 88 LIPIIYLHDSGLDLIIGNNFLKLYQPFIQRLETIELRWKNLNNPKESQMISTKILTKNEV 147
Query: 424 IKMLRQEIKFELQVLLTITKEMAENQLSEICSQNPLDKMKNKN 552
+K+ ++I L+ L + E QL E+CS++PLD+ KNKN
Sbjct: 148 LKLSFEKIHICLEKYLFF--KTIEEQLEEVCSEHPLDETKNKN 188
Score = 60.8 bits (146), Expect(2) = 3e-25
Identities = 29/52 (55%), Positives = 33/52 (63%)
Frame = +2
Query: 5 NIHVNTMSRQKTKINPNTTFITSKLQNKTILAYINTGATLCFGKRKILTNWE 160
N + R TK NPN TFI + + LAYI+TGATLCFGKRKI NWE
Sbjct: 2 NTEIVQKHRVLTKGNPNVTFIKVSIGKRNFLAYIDTGATLCFGKRKISNNWE 53
>ref|NP_042513.1| reverse transcriptase [Peanut chlorotic streak virus]
gi|555885|gb|AAA50240.1| reverse transcriptase [Peanut
chlorotic streak virus]
Length = 694
Score = 68.9 bits (167), Expect(3) = 6e-20
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Frame = +1
Query: 244 KSKNVPIAPRVYQHD*GIDLVIGNDFLKLYQAFVQTNDAISLDHPKKGK-----ITTPIL 408
+ K P+ P VYQ D G+ L++GN+FLKLY F+QT + ISL P+ K ITT I
Sbjct: 72 EGKRFPL-PSVYQQDAGLPLILGNNFLKLYNPFIQTLETISLRCPQLEKQPSSLITTKIY 130
Query: 409 KPRELIKMLRQEIKFELQVLLTITKEMAENQLSEICSQNPLDKMKNKN 552
L + I + Q+ + I E+ + L ICSQNPLD KN+N
Sbjct: 131 NTFSLFGGVIVNI-LKQQIYIAIEDEVTQ-LLEAICSQNPLDPQKNRN 176
Score = 43.5 bits (101), Expect(3) = 6e-20
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +2
Query: 53 NTTFITSKLQNKTILAYINTGATLCFGKRKIL--TNWEKTIKTNK 181
N++FI KL NK + AYI+TGAT+C + KIL W+K IK K
Sbjct: 5 NSSFIKVKLFNKYLYAYIDTGATICLAQAKILPIKYWKKMIKPIK 49
Score = 30.0 bits (66), Expect(3) = 6e-20
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 159 KKLLKPIKIVVADKSVHEIWY 221
KK++KPIK+ +A+ V IWY
Sbjct: 42 KKMIKPIKVRIANNKVIHIWY 62
>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
virus] gi|75559686|sp|Q7TD08.1|POL_CYLCV RecName:
Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase gi|32305282|gb|AAP78924.1| putative
multifunctional pol protein [Cestrum yellow leaf curling
virus]
Length = 643
Score = 53.5 bits (127), Expect(3) = 3e-19
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Frame = +1
Query: 262 IAPRVYQHD*GIDLVIGNDFLKLYQAFVQTNDAISLDHP-------KKGKITTPILKPRE 420
+A V Q G+D VIGN+FL+LYQ F+Q + I L P I P+ P +
Sbjct: 78 VAATVCQKSSGMDFVIGNNFLRLYQPFIQGLNYIKLRAPLDKDINQPSKMIYIPVTTPSK 137
Query: 421 LIKML----RQEIKFELQV---LLTITKEMAENQLSEICSQNPLDKMKNKN 552
+++ Q+I FEL V T + + L E+C +NPLD +KN N
Sbjct: 138 ILQFAILEKLQDILFELHVQENSKTPLELKVSSTLEEVCDENPLD-VKNTN 187
Score = 48.9 bits (115), Expect(3) = 3e-19
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +2
Query: 35 KTKINPNTTFITSKLQNKTILAYINTGATLCFGKRKILTNWEKTIKTNKNS 187
K+K NPN TFIT K+ + I AY++TGAT+C KI W K K K S
Sbjct: 2 KSKGNPNATFITVKINDVFINAYVDTGATICLADPKIKLKWVKMEKPIKIS 52
Score = 37.7 bits (86), Expect(3) = 3e-19
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3
Query: 162 KLLKPIKIVVADKSVHEIWYVEKMIKIEI 248
K+ KPIKI +ADKSV EIW+ +M++I I
Sbjct: 44 KMEKPIKISIADKSVQEIWHRAEMVEIWI 72
>gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]
Length = 680
Score = 45.4 bits (106), Expect(3) = 3e-12
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Frame = +1
Query: 262 IAPRVYQHD*GIDLVIGNDFLKLYQAFVQTNDAISLDHPKKGKITTPILKPRELIKM--- 432
+ P +YQ D G+ ++IGN+FL+LY F Q I+L PK I + +E+IK+
Sbjct: 99 LVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKM------INQKQEVIKIPIH 152
Query: 433 -LRQEIKFELQVLLT-ITKEMAENQLSEICSQN-PLDKMKNKN 552
Q IK +L L+T + +++ +Q+++I + LD + KN
Sbjct: 153 HSSQLIKAKLLNLVTNLEEQLLMDQVNKILQERFSLDLLGEKN 195
Score = 41.6 bits (96), Expect(3) = 3e-12
Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Frame = +2
Query: 23 MSRQKTKI---NPNTTFITSKLQNKTILAYINTGATLC 127
M+ QK KI N N TFI + KTILAYI+TGA+LC
Sbjct: 14 MTSQKKKIVQMNQNNTFIKITISQKTILAYIDTGASLC 51
Score = 28.9 bits (63), Expect(3) = 3e-12
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +3
Query: 159 KKLLKPIKIVVADKSVHEIWYVEKMIKIEIEK 254
K+L KPI I VADK +I V MI I IEK
Sbjct: 64 KELKKPITIRVADKRELQITKVALMITIIIEK 95
>gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]
Length = 667
Score = 45.8 bits (107), Expect(3) = 4e-12
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Frame = +1
Query: 262 IAPRVYQHD*GIDLVIGNDFLKLYQAFVQTNDAISLDHPKKGKITTPILKPRELIKM--- 432
+ P +YQ D G+ ++IGN+FL+LY F Q I+L PK I + +E+IK+
Sbjct: 86 LVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKM------INQKQEVIKIPIH 139
Query: 433 -LRQEIKFELQVLLT-ITKEMAENQLSEICSQN-PLDKMKNKN 552
Q IK +L L+T I +++ Q+++I + LD + KN
Sbjct: 140 HSSQLIKAKLLNLVTNIEEQLLMEQVNKILQERFSLDLLGEKN 182
Score = 40.8 bits (94), Expect(3) = 4e-12
Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Frame = +2
Query: 23 MSRQKTKI---NPNTTFITSKLQNKTILAYINTGATLC 127
M QK K+ N N TFI + KTILAYI+TGA+LC
Sbjct: 1 MKSQKKKVVQMNQNNTFIKITISQKTILAYIDTGASLC 38
Score = 28.9 bits (63), Expect(3) = 4e-12
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +3
Query: 159 KKLLKPIKIVVADKSVHEIWYVEKMIKIEIEK 254
K+L KPI I VADK +I V MI I IEK
Sbjct: 51 KELKKPITIRVADKRELQITKVALMITILIEK 82