BLASTX nr result

ID: Atractylodes21_contig00049779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049779
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi...   186   1e-45
ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
gb|AFK47126.1| unknown [Medicago truncatula]                          174   5e-42
ref|XP_003630737.1| Pentatricopeptide repeat-containing protein ...   174   5e-42

>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
           [Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
           protein product [Vitis vinifera]
          Length = 479

 Score =  186 bits (473), Expect = 1e-45
 Identities = 84/117 (71%), Positives = 98/117 (83%)
 Frame = -1

Query: 351 VHGGVVQEGKRYFNMMKNEYEIKPWLEHYGCMVDLFGRCGLLEEAREMVEEMPMEANVVI 172
           VHGG VQEGK YF+MM   Y + P ++HYGCMVDL GR GLLEEAR+MVE MPM+ANV++
Sbjct: 344 VHGGAVQEGKYYFDMMTTAYGLVPRMQHYGCMVDLLGRAGLLEEARKMVERMPMKANVIV 403

Query: 171 WGSLMGACEKYGNVKMGEWVAKHLQELVPWNDGVHMVMSNIYASYGLWEDVGRMRRI 1
           WG LMGACEKYGNVKMGEWVA+HL EL PWNDGV +V+SNIYAS GLW +V R+R +
Sbjct: 404 WGCLMGACEKYGNVKMGEWVAEHLLELEPWNDGVFVVLSNIYASRGLWREVERVRGV 460


>ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 614

 Score =  179 bits (453), Expect = 3e-43
 Identities = 76/117 (64%), Positives = 96/117 (82%)
 Frame = -1

Query: 351 VHGGVVQEGKRYFNMMKNEYEIKPWLEHYGCMVDLFGRCGLLEEAREMVEEMPMEANVVI 172
           VHGG++ EGK YF+MMKN Y  KP L HYGCMVDL  + GLLEEAR M+EEMPM+AN +I
Sbjct: 479 VHGGMINEGKHYFDMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEEMPMKANSII 538

Query: 171 WGSLMGACEKYGNVKMGEWVAKHLQELVPWNDGVHMVMSNIYASYGLWEDVGRMRRI 1
           WG L+G CEK+GNV++GEW  KHLQEL PWNDGV++V+SNIYA+ G+W++  +MR +
Sbjct: 539 WGCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEAQKMRDV 595


>ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 609

 Score =  179 bits (453), Expect = 3e-43
 Identities = 76/117 (64%), Positives = 96/117 (82%)
 Frame = -1

Query: 351 VHGGVVQEGKRYFNMMKNEYEIKPWLEHYGCMVDLFGRCGLLEEAREMVEEMPMEANVVI 172
           VHGG++ EGK YF+MMKN Y  KP L HYGCMVDL  + GLLEEAR M+EEMPM+AN +I
Sbjct: 474 VHGGMINEGKHYFDMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEEMPMKANSII 533

Query: 171 WGSLMGACEKYGNVKMGEWVAKHLQELVPWNDGVHMVMSNIYASYGLWEDVGRMRRI 1
           WG L+G CEK+GNV++GEW  KHLQEL PWNDGV++V+SNIYA+ G+W++  +MR +
Sbjct: 534 WGCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEAQKMRDV 590


>gb|AFK47126.1| unknown [Medicago truncatula]
          Length = 447

 Score =  174 bits (442), Expect = 5e-42
 Identities = 78/115 (67%), Positives = 96/115 (83%)
 Frame = -1

Query: 351 VHGGVVQEGKRYFNMMKNEYEIKPWLEHYGCMVDLFGRCGLLEEAREMVEEMPMEANVVI 172
           VHGG VQEG+ YF+MMKN Y I P L+HYGCMVDL GR GL ++AR MVEEMPM+ N V+
Sbjct: 312 VHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVV 371

Query: 171 WGSLMGACEKYGNVKMGEWVAKHLQELVPWNDGVHMVMSNIYASYGLWEDVGRMR 7
           WG LMGACEK+GNV M EWVA++LQ L PWN+GV++V+SNIYA+ GLW++V R+R
Sbjct: 372 WGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIR 426


>ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524759|gb|AET05213.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 447

 Score =  174 bits (442), Expect = 5e-42
 Identities = 78/115 (67%), Positives = 96/115 (83%)
 Frame = -1

Query: 351 VHGGVVQEGKRYFNMMKNEYEIKPWLEHYGCMVDLFGRCGLLEEAREMVEEMPMEANVVI 172
           VHGG VQEG+ YF+MMKN Y I P L+HYGCMVDL GR GL ++AR MVEEMPM+ N V+
Sbjct: 312 VHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVV 371

Query: 171 WGSLMGACEKYGNVKMGEWVAKHLQELVPWNDGVHMVMSNIYASYGLWEDVGRMR 7
           WG LMGACEK+GNV M EWVA++LQ L PWN+GV++V+SNIYA+ GLW++V R+R
Sbjct: 372 WGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIR 426


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