BLASTX nr result

ID: Atractylodes21_contig00049560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049560
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containi...   163   1e-38
ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containi...   162   2e-38
ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containi...   162   2e-38
ref|XP_002330058.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|XP_002319471.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34

>ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  163 bits (413), Expect = 1e-38
 Identities = 75/106 (70%), Positives = 91/106 (85%)
 Frame = +3

Query: 3   LIKKMPMEADAVIWGSLMGACRTHMNLEMAEVAAKKLVHLEPRNSGPYILLSNIYASKGR 182
           LI+KMP+EADA+IWG+L+GACRTHMN+ +AEVAAKKL+ LEP+N+GPYILLSNIYASKGR
Sbjct: 489 LIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGR 548

Query: 183 WSAVADIRKTMRSQKVQKTLGCSWIVIEKEVHMFRGGESTPHREHS 320
           W  VA++R+ MR +KV K+ GCSWI +EK VHMF GG ST H E S
Sbjct: 549 WGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELS 594


>ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  162 bits (411), Expect = 2e-38
 Identities = 73/106 (68%), Positives = 93/106 (87%)
 Frame = +3

Query: 3   LIKKMPMEADAVIWGSLMGACRTHMNLEMAEVAAKKLVHLEPRNSGPYILLSNIYASKGR 182
           LI+KMPMEADA+IWG+L+GACRTHM L++AEVAAKKL+ LEP+N+GP+ILLSNIYAS+GR
Sbjct: 571 LIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGR 630

Query: 183 WSAVADIRKTMRSQKVQKTLGCSWIVIEKEVHMFRGGESTPHREHS 320
           W  VA++R+ MR ++V K  GCSWIV+EK+VH F GG+S+ H EHS
Sbjct: 631 WDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHS 676


>ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  162 bits (411), Expect = 2e-38
 Identities = 73/106 (68%), Positives = 93/106 (87%)
 Frame = +3

Query: 3   LIKKMPMEADAVIWGSLMGACRTHMNLEMAEVAAKKLVHLEPRNSGPYILLSNIYASKGR 182
           LI+KMPMEADA+IWG+L+GACRTHM L++AEVAAKKL+ LEP+N+GP+ILLSNIYAS+GR
Sbjct: 571 LIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGR 630

Query: 183 WSAVADIRKTMRSQKVQKTLGCSWIVIEKEVHMFRGGESTPHREHS 320
           W  VA++R+ MR ++V K  GCSWIV+EK+VH F GG+S+ H EHS
Sbjct: 631 WDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHS 676


>ref|XP_002330058.1| predicted protein [Populus trichocarpa] gi|222871483|gb|EEF08614.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score =  154 bits (388), Expect = 9e-36
 Identities = 65/105 (61%), Positives = 90/105 (85%)
 Frame = +3

Query: 3   LIKKMPMEADAVIWGSLMGACRTHMNLEMAEVAAKKLVHLEPRNSGPYILLSNIYASKGR 182
           LI+ MP+EADA++WG+L+GACRTH NL++AE+AAKKL+ LEP N+GPYILLSN+Y+S+ R
Sbjct: 356 LIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSR 415

Query: 183 WSAVADIRKTMRSQKVQKTLGCSWIVIEKEVHMFRGGESTPHREH 317
           W  V ++RKTMR++ ++K+ GCSWI ++K+VH+F GG ST H EH
Sbjct: 416 WKDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEH 460


>ref|XP_002319471.1| predicted protein [Populus trichocarpa] gi|222857847|gb|EEE95394.1|
           predicted protein [Populus trichocarpa]
          Length = 703

 Score =  150 bits (379), Expect = 1e-34
 Identities = 65/105 (61%), Positives = 87/105 (82%)
 Frame = +3

Query: 3   LIKKMPMEADAVIWGSLMGACRTHMNLEMAEVAAKKLVHLEPRNSGPYILLSNIYASKGR 182
           LI+ MP+EADA++WG+L+ ACRTH NL++AE+AAKKL+ LEP ++GPYILLSN+YAS+ R
Sbjct: 489 LIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSR 548

Query: 183 WSAVADIRKTMRSQKVQKTLGCSWIVIEKEVHMFRGGESTPHREH 317
           W  VA++RKTMR++ V K+ GCSWI ++ +VHMF GG S  H EH
Sbjct: 549 WKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEH 593


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