BLASTX nr result

ID: Atractylodes21_contig00049549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049549
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    59   5e-07
ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
 Frame = -3

Query: 274  WISHRSNGSSISFTVRSTPN-KLTGLNFCYAFTKTEPIILM----SYIMISNKTKMCSWT 110
            W  H+S GSS+SFT+    + K+ GLN C  + +   +  +     Y  ++N+TK  +W+
Sbjct: 906  WFDHKSTGSSLSFTINPLSDYKIRGLNLCTVYARDHEVYWLHAAGHYARMNNETKGTNWS 965

Query: 109  YHHSTKGFFPVPFPDTNDVIVLTHWMLGKNEMEDGD 2
            Y   +  F+ +P  D  D++ L++W  G  E E GD
Sbjct: 966  Y---SPTFYALPEDDDEDMLWLSYWKFG-GEFEVGD 997


>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
 Frame = -3

Query: 274 WISHRSNGSSISFTVRSTPN-KLTGLNFC--YAFTKTEPIILMSY---IMISNKTKMCSW 113
           W SH+   +S+SF V   P+ K+ GLN C  Y    T+      Y     ISNKTK+  W
Sbjct: 295 WYSHQKQNNSVSFAVPPLPSRKIRGLNLCIVYGLRNTDKKCATLYPPDAEISNKTKVLKW 354

Query: 112 TYHHSTKGFFPVPFPDTNDVIVLTHWMLGKNEMEDGD 2
           +Y+    G   +      D++ L+HW  G +++E GD
Sbjct: 355 SYNPIVYGVPQI----GEDMLWLSHWRFGTDQLEVGD 387


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