BLASTX nr result

ID: Atractylodes21_contig00049542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049542
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   119   8e-32
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   119   7e-30
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]   118   5e-29
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   115   6e-29
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   120   8e-29

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  119 bits (297), Expect(2) = 8e-32
 Identities = 55/82 (67%), Positives = 66/82 (80%)
 Frame = -3

Query: 247  WPGMRRVVIAYVRACHTCQQQKVATVSPAGLLQPLPIPNQVWDEISMDFIEGLPRSQGVD 68
            W GMR+ V  YV  C  CQQQKV+   P GLLQPLPIP+ VW++ISMDFIEGLP S+GVD
Sbjct: 1201 WRGMRQEVARYVHQCLICQQQKVSQQHPRGLLQPLPIPSLVWEDISMDFIEGLPVSKGVD 1260

Query: 67   SIMVVVDRLTKYAHFLGLKHSF 2
            +I+V+VDRL+KYAHFL L+H F
Sbjct: 1261 TILVIVDRLSKYAHFLTLRHPF 1282



 Score = 43.1 bits (100), Expect(2) = 8e-32
 Identities = 20/30 (66%), Positives = 23/30 (76%)
 Frame = -1

Query: 336  PKLLHESCDAALGGHTGELKTYQRLADECF 247
            PKLL+E  DA +GGH GELKTY RLA E +
Sbjct: 1171 PKLLYEYHDAPMGGHAGELKTYLRLAAEWY 1200


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  119 bits (298), Expect(2) = 7e-30
 Identities = 49/82 (59%), Positives = 68/82 (82%)
 Frame = -3

Query: 247  WPGMRRVVIAYVRACHTCQQQKVATVSPAGLLQPLPIPNQVWDEISMDFIEGLPRSQGVD 68
            W GM++ VI +++ C  CQQ K ++++PAGLLQPLPIP  +W+++SMDF+EGLP+S G D
Sbjct: 970  WKGMKQDVITFIQECAVCQQNKTSSLAPAGLLQPLPIPTLIWEDVSMDFVEGLPKSGGWD 1029

Query: 67   SIMVVVDRLTKYAHFLGLKHSF 2
            SI+VVVDRL+KY HF+GL+H F
Sbjct: 1030 SILVVVDRLSKYGHFIGLRHPF 1051



 Score = 36.2 bits (82), Expect(2) = 7e-30
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -1

Query: 333  KLLHESCDAALGGHTGELKTYQRLADECF 247
            +L+HE     +GGH+G  KTYQRLA E F
Sbjct: 941  RLIHEYHATPMGGHSGIFKTYQRLATEWF 969


>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score =  118 bits (296), Expect(2) = 5e-29
 Identities = 55/82 (67%), Positives = 66/82 (80%)
 Frame = -3

Query: 247 WPGMRRVVIAYVRACHTCQQQKVATVSPAGLLQPLPIPNQVWDEISMDFIEGLPRSQGVD 68
           WP M R+V  YV +C  CQ+ K +T+SPAGLLQPLPIP QVWD+I+MDFIEGLP SQG +
Sbjct: 229 WPSMYRMVNEYVSSCDVCQRAKASTLSPAGLLQPLPIPCQVWDDITMDFIEGLPPSQGKN 288

Query: 67  SIMVVVDRLTKYAHFLGLKHSF 2
           +I+VVVDRL+K AHFL L H F
Sbjct: 289 TILVVVDRLSKSAHFLALTHPF 310



 Score = 34.3 bits (77), Expect(2) = 5e-29
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = -1

Query: 333 KLLHESCDAALGGHTGELKTYQRLADECF 247
           +LL E  D+ LGGH+G L+TY+R+A + +
Sbjct: 200 QLLREFHDSPLGGHSGVLRTYKRIAQQFY 228


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  115 bits (288), Expect(2) = 6e-29
 Identities = 50/82 (60%), Positives = 65/82 (79%)
 Frame = -3

Query: 247  WPGMRRVVIAYVRACHTCQQQKVATVSPAGLLQPLPIPNQVWDEISMDFIEGLPRSQGVD 68
            W GM+  +  YV  C  CQQ K   +SPAGLLQPLPIP+++W++ISMDFIEGLPRS+  D
Sbjct: 894  WEGMKNDIKIYVDQCPVCQQNKTQALSPAGLLQPLPIPSRIWEDISMDFIEGLPRSRTFD 953

Query: 67   SIMVVVDRLTKYAHFLGLKHSF 2
            S++VVVD+L+KYAHF+ L+H F
Sbjct: 954  SVLVVVDQLSKYAHFVALRHPF 975



 Score = 37.0 bits (84), Expect(2) = 6e-29
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -1

Query: 336 PKLLHESCDAALGGHTGELKTYQRLADECF 247
           P +LH   D  +GGH+G+L+TY+R+A E +
Sbjct: 864 PTILHTFHDLVVGGHSGQLRTYKRIAAELY 893


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  120 bits (301), Expect(2) = 8e-29
 Identities = 53/82 (64%), Positives = 68/82 (82%)
 Frame = -3

Query: 247  WPGMRRVVIAYVRACHTCQQQKVATVSPAGLLQPLPIPNQVWDEISMDFIEGLPRSQGVD 68
            W GM++ V  +V+ C  CQQ K +T+SPAGLLQPLPIP  +W++ISMDF+EGLP+SQG D
Sbjct: 1134 WKGMKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDISMDFVEGLPKSQGWD 1193

Query: 67   SIMVVVDRLTKYAHFLGLKHSF 2
            +I+VVVDRL+KYAHF+ LKH F
Sbjct: 1194 TILVVVDRLSKYAHFITLKHPF 1215



 Score = 31.6 bits (70), Expect(2) = 8e-29
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -1

Query: 330  LLHESCDAALGGHTGELKTYQRLADECF 247
            LL E   + +GGH+G  KTY+RLA E +
Sbjct: 1106 LLEEYHSSPMGGHSGIFKTYKRLAGEWY 1133


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