BLASTX nr result

ID: Atractylodes21_contig00049529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049529
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563123.1| PREDICTED: DNA repair protein RAD51 homolog ...    72   4e-11
gb|ACR37601.1| unknown [Zea mays] gi|414887878|tpg|DAA63892.1| T...    70   1e-10
ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog ...    69   4e-10
ref|NP_001149161.1| LOC100282783 [Zea mays] gi|195625178|gb|ACG3...    68   9e-10
ref|XP_002531104.1| DNA repair and recombination protein radB, p...    66   3e-09

>ref|XP_003563123.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Brachypodium
           distachyon]
          Length = 262

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 29/48 (60%), Positives = 39/48 (81%)
 Frame = -3

Query: 327 KPALGESWKSIPHVRLQLSRDHASNIYAVHILRHPYMASGRNATFMIP 184
           KPALGESWK++PHVRL +SRDH SN+Y   +L+H  +ASGR+  F++P
Sbjct: 215 KPALGESWKAVPHVRLMISRDHGSNMYTATVLKHTLLASGRHMKFVVP 262


>gb|ACR37601.1| unknown [Zea mays] gi|414887878|tpg|DAA63892.1| TPA: DNA repair
           protein RAD51 [Zea mays]
          Length = 298

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/49 (61%), Positives = 40/49 (81%)
 Frame = -3

Query: 330 LKPALGESWKSIPHVRLQLSRDHASNIYAVHILRHPYMASGRNATFMIP 184
           +KPALGESWKS+PHVRL +SR+H+SNI    +L+H  +ASGR A F++P
Sbjct: 250 VKPALGESWKSVPHVRLMISREHSSNICTGTVLKHTLLASGRTAKFVLP 298


>ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Cucumis
           sativus] gi|449518921|ref|XP_004166484.1| PREDICTED: DNA
           repair protein RAD51 homolog 4-like [Cucumis sativus]
          Length = 314

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/49 (67%), Positives = 37/49 (75%)
 Frame = -3

Query: 333 TLKPALGESWKSIPHVRLQLSRDHASNIYAVHILRHPYMASGRNATFMI 187
           T KPALGESWKS+PHVRLQLSRD  SN+    IL+H  MASG  A F+I
Sbjct: 264 TSKPALGESWKSVPHVRLQLSRDAGSNVCQASILKHSSMASGMTARFVI 312


>ref|NP_001149161.1| LOC100282783 [Zea mays] gi|195625178|gb|ACG34419.1| DNA repair
           protein RAD51 [Zea mays]
          Length = 298

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/48 (60%), Positives = 39/48 (81%)
 Frame = -3

Query: 330 LKPALGESWKSIPHVRLQLSRDHASNIYAVHILRHPYMASGRNATFMI 187
           +KPALGESWKS+PHVRL +SR+H+SNI    +L+H  +ASGR A F++
Sbjct: 250 VKPALGESWKSVPHVRLMISREHSSNICTGTVLKHTLLASGRTAKFVL 297


>ref|XP_002531104.1| DNA repair and recombination protein radB, putative [Ricinus
           communis] gi|223529300|gb|EEF31269.1| DNA repair and
           recombination protein radB, putative [Ricinus communis]
          Length = 315

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/47 (65%), Positives = 35/47 (74%)
 Frame = -3

Query: 327 KPALGESWKSIPHVRLQLSRDHASNIYAVHILRHPYMASGRNATFMI 187
           KPALGESWKSIPHVRL LSRD   N+  V IL+HP  ASG+ A F +
Sbjct: 267 KPALGESWKSIPHVRLLLSRDQGKNVCNVTILKHPSQASGKAARFTV 313


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