BLASTX nr result

ID: Atractylodes21_contig00049527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049527
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus ...    76   5e-12
ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06...    75   6e-12
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    75   8e-12
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    72   5e-11
gb|AFK46050.1| unknown [Medicago truncatula]                           71   1e-10

>ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542641|gb|EEF44178.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 406

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 7/132 (5%)
 Frame = +1

Query: 202 RSLPLDTPNSSMSESEMPNAVLPDEVVRDVLSRLPVKSLLQFRCVSKHWRDLIADTHFIK 381
           R+  L T +S+ +E +   + LP++++ ++LSR+PVK LL+F+CVSK W  +I+D  F K
Sbjct: 32  RTQRLRTKSSAQAEPDTSISTLPEDLIVEILSRVPVKPLLRFKCVSKSWNSIISDPRFAK 91

Query: 382 SNLKKVLASS--SHHQXXXXXXXXXXXXYNASPGDINASIELDCSFL-----KPRTSIKI 540
             LK+   +S  S ++            + A   D  ++   + SF       P   ++I
Sbjct: 92  LQLKRAKENSNISCNRLLLSTWSPRSLDFEAFCDDDLSNTITNVSFPAIVKGPPTFYVRI 151

Query: 541 LGSCNGLVCLID 576
           LGSC+GLVCL+D
Sbjct: 152 LGSCDGLVCLLD 163


>ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 375

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
 Frame = +1

Query: 265 LPDEVVRDVLSRLPVKSLLQFRCVSKHWRDLIADTHFIKSNLKKVLASSSHHQ---XXXX 435
           LP E++  +L RLPVKSLL+F+CVSK W  LI D HF KS+ +  LA++  H+       
Sbjct: 18  LPQELIIQILLRLPVKSLLRFKCVSKSWLSLITDPHFAKSHFE--LAAARTHRLVFFDTS 75

Query: 436 XXXXXXXXYNASPGDINASIELDCSFLKPRT--SIKILGSCNGLVCL 570
                   +NAS  D +AS+ L+ +FL   T  +++ILGSC G V L
Sbjct: 76  SLITRSIDFNASLHDDSASVALNINFLITDTCCNVQILGSCRGFVLL 122


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 48/118 (40%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
 Frame = +1

Query: 235 MSESEMPNAVLPDEVVRDVLSRLPVKSLLQFRCVSKHWRDLIADTHFIKSNLKKVLASS- 411
           MSES +P   LPDE+V ++LSRLPVKSLLQFRCV K W  LI D +F+K +L     S+ 
Sbjct: 40  MSES-LPLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSSRSTH 98

Query: 412 -SHHQXXXXXXXXXXXXYNASPGDINASIELDCSFLKPRTSIK-----ILGSCNGLVC 567
            +HH+             + S   +  ++   C  L      K     I+GSCNGL+C
Sbjct: 99  FTHHRIILSATTAEFHLKSCSLSSLFNNLSTVCDELNYPVKNKFRHDGIVGSCNGLLC 156


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
 Frame = +1

Query: 211 PLDTPNSSMSESEMPNAVLPDEVVRDVLSRLPVKSLLQFRCVSKHWRDLIADTHFIKS-- 384
           P   P        +P   LPDE+V ++LSRLPVKSLLQFRCV K W  LI+D +F+K   
Sbjct: 31  PSSVPKQQPMSESLPLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHL 90

Query: 385 NLKKVLASSSHHQXXXXXXXXXXXXYNASPGDI-NASIELDCSFLKPRTSIK-----ILG 546
           +L       +HH+             + S   + N      C  L      K     I+G
Sbjct: 91  HLSSRCTHFTHHRIILSATTAEFHLKSCSLSSLFNNPSSTVCDDLNYPVKNKFRHDGIVG 150

Query: 547 SCNGLVC 567
           SCNGL+C
Sbjct: 151 SCNGLLC 157


>gb|AFK46050.1| unknown [Medicago truncatula]
          Length = 334

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
 Frame = +1

Query: 229 SSMSESEMPNAVLPDEVVRDVLSRLPVKSLLQFRCVSKHWRDLIADTHFIKSNLKKVLAS 408
           +++++S   N  LP ++V D+L RLPVKSL QF+ VSK W+ LI+D++F K NL+    S
Sbjct: 5   TTVTKSRRSNPTLPFDLVEDILYRLPVKSLAQFKSVSKSWKSLISDSNFTKKNLR---VS 61

Query: 409 SSHHQXXXXXXXXXXXXYNA----SPGDINASIELDCSFLKPRTSIKILGSCNGLVCL 570
           ++ H+            +NA    SP     +       L  R   KI GSC+G++CL
Sbjct: 62  TTSHRLLFPKLTKGQYIFNACTLSSPITTKGTATAMQHPLNIRKFDKIRGSCHGILCL 119


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