BLASTX nr result

ID: Atractylodes21_contig00049510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049510
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34144.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002264443.1| PREDICTED: DNA-damage-repair/toleration prot...    64   2e-08
ref|XP_002331535.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002316597.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>emb|CBI34144.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/56 (62%), Positives = 41/56 (73%), Gaps = 4/56 (7%)
 Frame = +3

Query: 180 IKDTLTDVKHGGFFSTWNFSSPENPCSSFAGVTCSV----INRQLRVTNLFLGTGL 335
           IK+TLTDV    FFSTW+F+SP  PCS+FAGV CS+     N  LRVT+L LGTGL
Sbjct: 39  IKNTLTDVPGTHFFSTWDFASP-RPCSAFAGVICSLDDSSPNPTLRVTSLILGTGL 93


>ref|XP_002264443.1| PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Vitis
           vinifera]
          Length = 427

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/56 (62%), Positives = 41/56 (73%), Gaps = 4/56 (7%)
 Frame = +3

Query: 180 IKDTLTDVKHGGFFSTWNFSSPENPCSSFAGVTCSV----INRQLRVTNLFLGTGL 335
           IK+TLTDV    FFSTW+F+SP  PCS+FAGV CS+     N  LRVT+L LGTGL
Sbjct: 49  IKNTLTDVPGTHFFSTWDFASP-RPCSAFAGVICSLDDSSPNPTLRVTSLILGTGL 103


>ref|XP_002331535.1| predicted protein [Populus trichocarpa] gi|222873759|gb|EEF10890.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/52 (59%), Positives = 40/52 (76%)
 Frame = +3

Query: 180 IKDTLTDVKHGGFFSTWNFSSPENPCSSFAGVTCSVINRQLRVTNLFLGTGL 335
           IKD+LTD+    FFSTW+F+SP+ PCS+F+G+TCS+     RVT L LGTGL
Sbjct: 42  IKDSLTDIPGSNFFSTWDFTSPD-PCSTFSGITCSL----NRVTILTLGTGL 88


>ref|XP_002316597.1| predicted protein [Populus trichocarpa] gi|222859662|gb|EEE97209.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/52 (55%), Positives = 40/52 (76%)
 Frame = +3

Query: 180 IKDTLTDVKHGGFFSTWNFSSPENPCSSFAGVTCSVINRQLRVTNLFLGTGL 335
           +KD+LTD+    FFSTW+F+SP+ PCS+F+G+TCS+     RVT L LGTG+
Sbjct: 41  VKDSLTDIPGSNFFSTWDFTSPD-PCSAFSGITCSL----NRVTILTLGTGV 87


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