BLASTX nr result
ID: Atractylodes21_contig00049476
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00049476 (299 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 63 1e-11 gb|ACY01928.1| hypothetical protein [Beta vulgaris] 48 3e-09 gb|AEV42261.1| hypothetical protein [Beta vulgaris] 49 4e-09 >gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris] Length = 1631 Score = 63.2 bits (152), Expect(2) = 1e-11 Identities = 34/57 (59%), Positives = 40/57 (70%) Frame = -2 Query: 295 ATRPYEKLAPRFYGPFIVLQLATSGQGGIQITASTPRIHLVFHVSQLKLAVGNQPVL 125 A RP+EKLAPRFYGPF VLQ + +Q+ S+ +IH VFHVS LK VGN PVL Sbjct: 1470 AKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSS-KIHPVFHVSLLKKVVGNTPVL 1525 Score = 30.8 bits (68), Expect(2) = 1e-11 Identities = 15/39 (38%), Positives = 25/39 (64%) Frame = -1 Query: 119 LPPQLTVDLEMEGQLEKLLGVRFNTQIARSPKEVLIQWR 3 +PP + VD+E+ + E+LL VR Q ++ E LI+W+ Sbjct: 1528 IPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWK 1566 >gb|ACY01928.1| hypothetical protein [Beta vulgaris] Length = 1583 Score = 47.8 bits (112), Expect(2) = 3e-09 Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = -2 Query: 295 ATRPYEKLAPRFYGPFIVLQLATSGQGGIQITAST-PRIHLVFHVSQLKLAVGN 137 A + EKLAPRFYGPF VL+ GQ Q+ ++H VFH+SQLK AVG+ Sbjct: 1403 AKKRNEKLAPRFYGPFSVLK--RIGQVAYQLQLPLGAKLHPVFHISQLKKAVGS 1454 Score = 38.1 bits (87), Expect(2) = 3e-09 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = -1 Query: 143 GKPTCSLLLPPQLTVDLEMEGQLEKLLGVRFNTQIARSPKEVLIQW 6 G S +PPQLT DL ++ Q E LL +R + Q EVLI+W Sbjct: 1453 GSLQSSPTIPPQLTNDLVLDAQPESLLNIRSHPQKPAEVTEVLIKW 1498 >gb|AEV42261.1| hypothetical protein [Beta vulgaris] Length = 1396 Score = 48.5 bits (114), Expect(2) = 4e-09 Identities = 27/56 (48%), Positives = 36/56 (64%) Frame = -2 Query: 295 ATRPYEKLAPRFYGPFIVLQLATSGQGGIQITASTPRIHLVFHVSQLKLAVGNQPV 128 A R EKLAPR+YGPF VL+ + + + + +IH VFH+SQL+ AVG PV Sbjct: 1239 AKRLNEKLAPRYYGPFPVLKRIGTVAYELDLPPHS-KIHPVFHISQLRKAVGTAPV 1293 Score = 37.0 bits (84), Expect(2) = 4e-09 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = -1 Query: 122 LLPPQLTVDLEMEGQLEKLLGVRFNTQIARSPKEVLIQW 6 +LPP LT DL + ++LG+R N +P E+L+QW Sbjct: 1296 VLPPLLTTDLVLPSSPSQVLGIRPNPLNQAAPAEILVQW 1334