BLASTX nr result

ID: Atractylodes21_contig00049399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049399
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   171   6e-41
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   157   1e-36
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   145   3e-33
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   135   5e-30
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   127   9e-28

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  171 bits (433), Expect = 6e-41
 Identities = 87/152 (57%), Positives = 110/152 (72%), Gaps = 4/152 (2%)
 Frame = +2

Query: 5   KWSVGHRCRRRELSVLLTQD---DXXXXXXXXXXXXXDINEVITYEISLNSVVGLSDPKT 175
           KW VGH+CRR+ELSVL  +D   D                E I  E+SLNSV+GLS+PKT
Sbjct: 423 KWGVGHQCRRKELSVLFMEDNEEDELEGALSGSEAPPSPTEEIPPEVSLNSVIGLSNPKT 482

Query: 176 MKMLGSIQGLEVVVMIDPGATHNFLSTTAVEKLSIPVSPTKGFGVSLGNGEVVRGTGVCK 355
           MK+ G I   EVVVMIDPGATHNFLS  A++KL IPV+ ++ FGVSLG+G+ VRGTG+C+
Sbjct: 483 MKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPVTESEEFGVSLGDGQAVRGTGICR 542

Query: 356 AVVIEVQ-GVRICDDFLPLGLGNADVILGIQW 448
           AV + +  G+ + +DFLPLGLGN+DVILG+QW
Sbjct: 543 AVALYLDGGLVVVEDFLPLGLGNSDVILGVQW 574


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  157 bits (396), Expect = 1e-36
 Identities = 75/154 (48%), Positives = 106/154 (68%), Gaps = 6/154 (3%)
 Frame = +2

Query: 5   KWSVGHRCRRRELSVLLTQDDXXXXXXXXXXXXXDIN------EVITYEISLNSVVGLSD 166
           KW++GHRC+++ELS+LL  ++               +      E+ + EISLNSV+G+S 
Sbjct: 357 KWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQPAHPDDSQLEIHSPEISLNSVMGISS 416

Query: 167 PKTMKMLGSIQGLEVVVMIDPGATHNFLSTTAVEKLSIPVSPTKGFGVSLGNGEVVRGTG 346
           PKT+KM G+I G +V+VM+DPGATHNF+S   V +L IP+S ++ FGVSLG G    G G
Sbjct: 417 PKTLKMEGTIYGQKVIVMVDPGATHNFISLDTVRRLQIPISSSRPFGVSLGTGAEAHGQG 476

Query: 347 VCKAVVIEVQGVRICDDFLPLGLGNADVILGIQW 448
            CKAV + +QGV + +D+LPL LGN+D+ILG+QW
Sbjct: 477 ECKAVPLHLQGVCVMEDYLPLTLGNSDLILGVQW 510


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  145 bits (366), Expect = 3e-33
 Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 9/157 (5%)
 Frame = +2

Query: 5   KWSVGHRCRRRELSVLLT--QDDXXXXXXXXXXXXXDINEV------ITYEISLNSVVGL 160
           KWSVGHRC++ ELSVLL+  +D+             +I         +  EISLNSV+G 
Sbjct: 314 KWSVGHRCKK-ELSVLLSCKEDEEIEYGELENAPQPEIPNTHIAETFVNPEISLNSVMGF 372

Query: 161 SDPKTMKMLGSIQGLEVVVMIDPGATHNFLSTTAVEKLSIPVSPTKGFGVSLGNGEVVRG 340
           S+PKT+K+ G+I G  V+VMIDPGATHNF+S   VE+L+IPVS  KGF VSLG G+ VRG
Sbjct: 373 SNPKTLKLRGTIYGEAVIVMIDPGATHNFVSIHTVERLNIPVSHAKGFEVSLGTGQEVRG 432

Query: 341 TGVCKAVVIEVQGVRICDDFL-PLGLGNADVILGIQW 448
           TG C AV + VQGV   ++FL P  LGN+DVI+GIQW
Sbjct: 433 TGECLAVPLMVQGV--MENFLPPPPLGNSDVIMGIQW 467


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  135 bits (339), Expect = 5e-30
 Identities = 69/152 (45%), Positives = 99/152 (65%), Gaps = 4/152 (2%)
 Frame = +2

Query: 5    KWSVGHRCRRRELSVLLTQDDXXXXXXXXXXXXXDINEVI----TYEISLNSVVGLSDPK 172
            K+S GHRC++ EL VLL  +D             +   +I      E+SLNSVVGL+ P 
Sbjct: 999  KFSPGHRCKK-ELRVLLVHEDEEEDDNQFDDRATEEPALIELKDAVELSLNSVVGLTTPG 1057

Query: 173  TMKMLGSIQGLEVVVMIDPGATHNFLSTTAVEKLSIPVSPTKGFGVSLGNGEVVRGTGVC 352
            TMK+ G+I   EV++++D GATHNFLS   V++L++P++ T  +GV +G G  V+G G+C
Sbjct: 1058 TMKIKGTIGSKEVIILVDSGATHNFLSLELVQQLTLPLTTTTSYGVMMGTGISVKGKGIC 1117

Query: 353  KAVVIEVQGVRICDDFLPLGLGNADVILGIQW 448
            + V I +QG+ + +DFLPL LGN DVILG+ W
Sbjct: 1118 RGVCISMQGLTVVEDFLPLELGNTDVILGMPW 1149


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  127 bits (319), Expect = 9e-28
 Identities = 64/148 (43%), Positives = 95/148 (64%), Gaps = 1/148 (0%)
 Frame = +2

Query: 8   WSVGHRCRRRELSVLLTQDDXXXXXXXXXXXXXDINEV-ITYEISLNSVVGLSDPKTMKM 184
           +S GHRC+ REL + +  DD              + E+    E+SL+SVVGL+ P T K+
Sbjct: 313 FSKGHRCKNRELKLCVVADDLIDTEMSEEDNDGGMVEIGPIVELSLSSVVGLTAPGTSKI 372

Query: 185 LGSIQGLEVVVMIDPGATHNFLSTTAVEKLSIPVSPTKGFGVSLGNGEVVRGTGVCKAVV 364
            G ++  EVVVMID GATHNF+S   VE++ I  + T  +GV +G+G+ V+G G+C  VV
Sbjct: 373 KGKVEDREVVVMIDCGATHNFISLRLVEEMQIATTETTQYGVIMGSGKAVQGKGMCTGVV 432

Query: 365 IEVQGVRICDDFLPLGLGNADVILGIQW 448
           + + G+ + +DFLPL LG+ D++LG+QW
Sbjct: 433 VGLPGLTVVEDFLPLELGHLDMVLGMQW 460


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