BLASTX nr result

ID: Atractylodes21_contig00049396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049396
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
emb|CBI26947.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containi...    63   2e-08
ref|XP_002526312.1| pentatricopeptide repeat-containing protein,...    63   2e-08

>ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/48 (64%), Positives = 39/48 (81%)
 Frame = +2

Query: 2   GNWSEALRLYTEMLERGIKPDSCTHSALLKQLGMNSKARAVHYLEHVV 145
           GNW EAL LY +ML+RG++PDSCTHSALLKQLG + K +AV  LE ++
Sbjct: 668 GNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLL 715


>emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +2

Query: 2   GNWSEALRLYTEMLERGIKPDSCTHSALLKQLGMNSKARAVH 127
           GNW EAL LY +ML+RG++PDSCTHSALLKQLG + K +AVH
Sbjct: 668 GNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVH 709


>ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   GNWSEALRLYTEMLERGIKPDSCTHSALLKQLGMNSKARAVHYLEHVVLGNE 157
           G+W EALRLY +ML+R I+PDSCTHSALLK L  + K+  V +LE+V+   E
Sbjct: 624 GHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSHVVRHLENVIAAGE 675


>ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = +2

Query: 2   GNWSEALRLYTEMLERGIKPDSCTHSALLKQLGMNSKARAVHYLEHVVLGNE 157
           G+W EALRLY +ML+R I+PDSCTH +LLK L  + K   V +LE+V+   E
Sbjct: 636 GHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRHLENVIAAGE 687


>ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534393|gb|EEF36101.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 729

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/59 (47%), Positives = 41/59 (69%)
 Frame = +2

Query: 2   GNWSEALRLYTEMLERGIKPDSCTHSALLKQLGMNSKARAVHYLEHVVLGNEDVGEAKS 178
           G W EALRLY +ML + I+PDSCTH ALLK+L  + K +AV ++E ++L  +   +A +
Sbjct: 671 GKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQFIESLILDGDRTIDANT 729


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