BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049381
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269723.2| PREDICTED: DNA-directed RNA polymerases I, I...   144   1e-32
emb|CBI35146.3| unnamed protein product [Vitis vinifera]              144   1e-32
emb|CAN60800.1| hypothetical protein VITISV_022856 [Vitis vinifera]   143   1e-32
ref|XP_002297750.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
ref|NP_191013.1| RNA polymerase II fifth largest subunit, E [Ara...   130   1e-28

>ref|XP_002269723.2| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 221

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/113 (61%), Positives = 87/113 (76%)
 Frame = -3

Query: 417 NKESLHRIIIVLQDKMNHFARNVFNECQVKVENFQITELFVNITKHVGVPKHEILTTQEK 238
           N+E LHR+I+VLQ KMN  AR V +E  +KVE FQITEL +NITKHV VPKHEIL+ QEK
Sbjct: 108 NREGLHRLILVLQSKMNSHARKVVDEYPIKVEFFQITELLINITKHVSVPKHEILSAQEK 167

Query: 237 KQMLEKHELADIQIPYILESDAIARYYGLEKKQVVKVSYNSKITGSFVNYRCV 79
           ++++ K++L D Q P + + DAIARYYGLEK QVVK++Y   +T S V YRCV
Sbjct: 168 RKLVNKYKLEDKQFPIMQKDDAIARYYGLEKGQVVKITYKGGMTDSLVTYRCV 220


>emb|CBI35146.3| unnamed protein product [Vitis vinifera]
          Length = 731

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/113 (61%), Positives = 87/113 (76%)
 Frame = -3

Query: 417 NKESLHRIIIVLQDKMNHFARNVFNECQVKVENFQITELFVNITKHVGVPKHEILTTQEK 238
           N+E LHR+I+VLQ KMN  AR V +E  +KVE FQITEL +NITKHV VPKHEIL+ QEK
Sbjct: 618 NREGLHRLILVLQSKMNSHARKVVDEYPIKVEFFQITELLINITKHVSVPKHEILSAQEK 677

Query: 237 KQMLEKHELADIQIPYILESDAIARYYGLEKKQVVKVSYNSKITGSFVNYRCV 79
           ++++ K++L D Q P + + DAIARYYGLEK QVVK++Y   +T S V YRCV
Sbjct: 678 RKLVNKYKLEDKQFPIMQKDDAIARYYGLEKGQVVKITYKGGMTDSLVTYRCV 730


>emb|CAN60800.1| hypothetical protein VITISV_022856 [Vitis vinifera]
          Length = 162

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/113 (61%), Positives = 87/113 (76%)
 Frame = -3

Query: 417 NKESLHRIIIVLQDKMNHFARNVFNECQVKVENFQITELFVNITKHVGVPKHEILTTQEK 238
           N+E LHR+I+VLQ KMN  AR V +E  +KVE FQITEL +NITKHV VPKHEIL+ QEK
Sbjct: 49  NREGLHRLILVLQSKMNSHARKVVDEYPIKVEFFQITELLINITKHVSVPKHEILSAQEK 108

Query: 237 KQMLEKHELADIQIPYILESDAIARYYGLEKKQVVKVSYNSKITGSFVNYRCV 79
           ++++ K++L D Q P + + DAIARYYGLEK QVVK++Y   +T S V YRCV
Sbjct: 109 RKLVNKYKLEDKQXPIMQKDDAIARYYGLEKGQVVKITYKGGMTDSLVTYRCV 161


>ref|XP_002297750.1| predicted protein [Populus trichocarpa] gi|222845008|gb|EEE82555.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/113 (54%), Positives = 86/113 (76%)
 Frame = -3

Query: 417 NKESLHRIIIVLQDKMNHFARNVFNECQVKVENFQITELFVNITKHVGVPKHEILTTQEK 238
           NKESLH +I++LQ KMNHFA+    +   KVE FQIT+L VNITKHV  P+ +ILT ++K
Sbjct: 120 NKESLHGLILILQSKMNHFAKKELEKFPFKVEVFQITDLLVNITKHVLQPQMDILTAEQK 179

Query: 237 KQMLEKHELADIQIPYILESDAIARYYGLEKKQVVKVSYNSKITGSFVNYRCV 79
           +Q++ K++L D Q+P +LESDAI +YYGL+K Q+VK++Y+ +I    V YRCV
Sbjct: 180 QQVMNKYKLEDKQLPRMLESDAIVQYYGLQKGQMVKITYSGEIVDHLVTYRCV 232


>ref|NP_191013.1| RNA polymerase II fifth largest subunit, E [Arabidopsis thaliana]
           gi|7258352|emb|CAB77569.1| RNA polymerase 24kDa
           subunit-like protein [Arabidopsis thaliana]
           gi|332645717|gb|AEE79238.1| RNA polymerase II fifth
           largest subunit, E [Arabidopsis thaliana]
          Length = 233

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/114 (53%), Positives = 78/114 (68%)
 Frame = -3

Query: 417 NKESLHRIIIVLQDKMNHFARNVFNECQVKVENFQITELFVNITKHVGVPKHEILTTQEK 238
           N   LH +I+VLQ KMNHFA+         VE F I +L VNITKH+  PK EIL  +EK
Sbjct: 120 NNVGLHAMILVLQSKMNHFAQKALTTFPFTVETFPIEDLLVNITKHIQQPKIEILNKEEK 179

Query: 237 KQMLEKHELADIQIPYILESDAIARYYGLEKKQVVKVSYNSKITGSFVNYRCVI 76
           +Q+L KH L D Q+PY+ E D+  RYYGL+KKQVVK++Y+ +  G FV YRC+I
Sbjct: 180 EQLLRKHALEDKQLPYLQEKDSFVRYYGLKKKQVVKITYSKEPVGDFVTYRCII 233