BLASTX nr result

ID: Atractylodes21_contig00049341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049341
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27...   227   9e-58
emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]   224   4e-57
ref|XP_002298618.1| f-box family protein [Populus trichocarpa] g...   207   5e-52
ref|XP_002328886.1| f-box family protein [Populus trichocarpa] g...   203   1e-50
ref|XP_002509526.1| ubiquitin-protein ligase, putative [Ricinus ...   202   2e-50

>ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Vitis
           vinifera]
          Length = 437

 Score =  227 bits (578), Expect = 9e-58
 Identities = 108/156 (69%), Positives = 124/156 (79%), Gaps = 2/156 (1%)
 Frame = +1

Query: 13  CSSSNEDPEEPQDADYI--PSLSYELEGLILARFPRSKYWKLSFVNKRYDALVKSNELFK 186
           C   +    + QDADY   PSLSYE+EGLILAR PRS+YWK  FVNKRY  L+KS ELFK
Sbjct: 72  CRVGSSSAVDTQDADYSDGPSLSYEVEGLILARVPRSEYWKFCFVNKRYLTLLKSGELFK 131

Query: 187 IRRHIGFSEPSVLMLASGENCWWAFDRGFGSRRKLPVLPTDICFTSGDKESLCAGTHLLV 366
           IRR IG  E SV MLASGE  WWAFDR F SRR+LP+LP+D CFTS DKES+CAGTHL+V
Sbjct: 132 IRREIGVKESSVFMLASGETSWWAFDRQFESRRRLPILPSDPCFTSADKESVCAGTHLIV 191

Query: 367 SGREIESLMIWRYESATSKWYKGPSMINPRCLFASA 474
           SGRE E ++IWRYE A +KW+KGPSM+NPRC+FASA
Sbjct: 192 SGREFEGVVIWRYELAMNKWFKGPSMLNPRCMFASA 227


>emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]
          Length = 514

 Score =  224 bits (572), Expect = 4e-57
 Identities = 107/156 (68%), Positives = 123/156 (78%), Gaps = 2/156 (1%)
 Frame = +1

Query: 13  CSSSNEDPEEPQDADYI--PSLSYELEGLILARFPRSKYWKLSFVNKRYDALVKSNELFK 186
           C   +    + QDADY   PSLSYE+EGLILAR PRS+YWK  FVNKRY  L+KS ELFK
Sbjct: 149 CRVGSSSAVDTQDADYSDGPSLSYEVEGLILARVPRSEYWKFCFVNKRYLTLLKSGELFK 208

Query: 187 IRRHIGFSEPSVLMLASGENCWWAFDRGFGSRRKLPVLPTDICFTSGDKESLCAGTHLLV 366
           IRR IG  E SV MLASGE  WWAFDR F  RR+LP+LP+D CFTS DKES+CAGTHL+V
Sbjct: 209 IRREIGVKESSVFMLASGETSWWAFDRQFEYRRRLPILPSDPCFTSADKESVCAGTHLIV 268

Query: 367 SGREIESLMIWRYESATSKWYKGPSMINPRCLFASA 474
           SGRE E ++IWRYE A +KW+KGPSM+NPRC+FASA
Sbjct: 269 SGREFEGVVIWRYELAMNKWFKGPSMLNPRCMFASA 304


>ref|XP_002298618.1| f-box family protein [Populus trichocarpa]
           gi|222845876|gb|EEE83423.1| f-box family protein
           [Populus trichocarpa]
          Length = 390

 Score =  207 bits (528), Expect = 5e-52
 Identities = 102/153 (66%), Positives = 117/153 (76%)
 Frame = +1

Query: 19  SSNEDPEEPQDADYIPSLSYELEGLILARFPRSKYWKLSFVNKRYDALVKSNELFKIRRH 198
           SSN  P++  D  Y P LS ELE LILAR PRS+YWK   VNKR  +LVKS ELFKIRR 
Sbjct: 29  SSNVKPQDT-DYSYAPQLSDELENLILARVPRSEYWKFPNVNKRILSLVKSGELFKIRRE 87

Query: 199 IGFSEPSVLMLASGENCWWAFDRGFGSRRKLPVLPTDICFTSGDKESLCAGTHLLVSGRE 378
           IG  E SV + A+G+  WWAFDR F SRRKLP LP D CF+ GDKESLCAGTHL++SGRE
Sbjct: 88  IGVRESSVFIFATGDKSWWAFDRQFCSRRKLPDLPADCCFSFGDKESLCAGTHLIISGRE 147

Query: 379 IESLMIWRYESATSKWYKGPSMINPRCLFASAT 477
           IE +++WRYE  T+ W KGPSMINPRCLFASA+
Sbjct: 148 IEGVVVWRYELETNSWNKGPSMINPRCLFASAS 180


>ref|XP_002328886.1| f-box family protein [Populus trichocarpa]
           gi|222839316|gb|EEE77653.1| f-box family protein
           [Populus trichocarpa]
          Length = 389

 Score =  203 bits (516), Expect = 1e-50
 Identities = 96/148 (64%), Positives = 113/148 (76%), Gaps = 2/148 (1%)
 Frame = +1

Query: 40  EPQDADY--IPSLSYELEGLILARFPRSKYWKLSFVNKRYDALVKSNELFKIRRHIGFSE 213
           EPQDADY  +P L  ELE  ILAR PRS+YWK   VNKR  +LVKS EL  IRR IGF E
Sbjct: 33  EPQDADYSYVPQLCDELENQILARVPRSEYWKFRIVNKRILSLVKSGELLNIRREIGFRE 92

Query: 214 PSVLMLASGENCWWAFDRGFGSRRKLPVLPTDICFTSGDKESLCAGTHLLVSGREIESLM 393
             V + A+G+  WWAFD+ F SRRKLP +P D CF+ GDKES+CAGTHL++SGREIE ++
Sbjct: 93  SLVFIFATGDKSWWAFDQQFSSRRKLPDIPADCCFSFGDKESICAGTHLIISGREIEGVV 152

Query: 394 IWRYESATSKWYKGPSMINPRCLFASAT 477
           +WRYE  T+ W KGPSMINPRCLFASA+
Sbjct: 153 VWRYELETNSWNKGPSMINPRCLFASAS 180


>ref|XP_002509526.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223549425|gb|EEF50913.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 483

 Score =  202 bits (515), Expect = 2e-50
 Identities = 96/148 (64%), Positives = 114/148 (77%), Gaps = 2/148 (1%)
 Frame = +1

Query: 40  EPQDADYI--PSLSYELEGLILARFPRSKYWKLSFVNKRYDALVKSNELFKIRRHIGFSE 213
           +PQDADY   P LS E+E  ILAR PRS+YWK   VNKR  ALVKS ELFKIRR +G  E
Sbjct: 126 QPQDADYFEYPQLSDEVENQILARVPRSEYWKFPLVNKRIYALVKSGELFKIRRELGVRE 185

Query: 214 PSVLMLASGENCWWAFDRGFGSRRKLPVLPTDICFTSGDKESLCAGTHLLVSGREIESLM 393
            SV M  +G++ WWAFDR F  RRKLP LP D CF+SGDKE++CAGTHL++SGREI  ++
Sbjct: 186 SSVFMFTTGDSGWWAFDRQFSCRRKLPDLPADPCFSSGDKETVCAGTHLIISGREINGVV 245

Query: 394 IWRYESATSKWYKGPSMINPRCLFASAT 477
           +WRYE  T++W KGPSMI PRCLFASA+
Sbjct: 246 VWRYELETNRWRKGPSMIKPRCLFASAS 273


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