BLASTX nr result

ID: Atractylodes21_contig00049312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00049312
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146198.1| PREDICTED: F-box/kelch-repeat protein SKIP25...   125   3e-27
ref|XP_002330862.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25...   125   5e-27
ref|XP_002531898.1| conserved hypothetical protein [Ricinus comm...   124   6e-27

>ref|XP_004146198.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Cucumis sativus]
           gi|449521327|ref|XP_004167681.1| PREDICTED:
           F-box/kelch-repeat protein SKIP25-like [Cucumis sativus]
          Length = 375

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/110 (56%), Positives = 78/110 (70%)
 Frame = -3

Query: 330 ATSGHLLPALPRPLIFNPLTKTWSSGPPLSTPRRWCAAGALRGTVVVASGIGSHYTQAVA 151
           AT+ +LLPALPRPL+F+P + +W   PPL TPRRWCAAGAL G+V VASGIGS ++  VA
Sbjct: 138 ATTYNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALHGSVYVASGIGSFFSTDVA 197

Query: 150 RSVEKWALRKTESFDKRRRDSDGINWEKMRSLRTSKLCREAIDAVGWRGK 1
           RSVE+W        D +   +DG  WEK+  L+  K  R+AIDAVGW+GK
Sbjct: 198 RSVERW--------DFKSNGADG--WEKVSGLKDGKFSRDAIDAVGWKGK 237


>ref|XP_002330862.1| predicted protein [Populus trichocarpa] gi|222872684|gb|EEF09815.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
 Frame = -3

Query: 330 ATSGHLLPALPRPLIFNPLTKTWSSGPPLSTPRRWCAAGALRGTVVVASGIGSHYTQAVA 151
           ATS +  PAL RPL+FNPL+  W  GPPL+TPRRWCAAG+ + TV VASGIGS +   V+
Sbjct: 153 ATSHNFSPALSRPLVFNPLSGVWGFGPPLTTPRRWCAAGSAKDTVYVASGIGSQFNTDVS 212

Query: 150 RSVEKWALR-KTESFDKRRRDSDGINWEKMRSLRTSKLCREAIDAVGWRGK 1
           +SVEKW L+ K          +    WEK++ L+  + CR+AIDAVGWRGK
Sbjct: 213 KSVEKWDLQSKNVGISTIANKTITWKWEKVKGLKDGRFCRDAIDAVGWRGK 263


>ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|222850628|gb|EEE88175.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/111 (54%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
 Frame = -3

Query: 330 ATSGHLLPALPRPLIFNPLTKTWSSGPPLSTPRRWCAAGALRGTVVVASGIGSHYTQAVA 151
           ATS    PAL RPL+FNPL+ +W+ GPPL+TPRRWCAAG+  GTV VASGIGS Y   VA
Sbjct: 151 ATSHSFSPALSRPLVFNPLSGSWAFGPPLATPRRWCAAGSAHGTVYVASGIGSQYNTDVA 210

Query: 150 RSVEKWALRKTES-FDKRRRDSDGINWEKMRSLRTSKLCREAIDAVGWRGK 1
           +S+EKW L+  ++     R  +    W K++ L+  +  R+AIDAVGWRGK
Sbjct: 211 KSLEKWDLQNQKAMISNIRNKTTTWKWVKVKELKNGRFSRDAIDAVGWRGK 261


>ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Glycine max]
          Length = 375

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/110 (57%), Positives = 76/110 (69%)
 Frame = -3

Query: 330 ATSGHLLPALPRPLIFNPLTKTWSSGPPLSTPRRWCAAGALRGTVVVASGIGSHYTQAVA 151
           AT+ +L PALPRPLIF+PLTKTWS GP LSTPRRWCA G+L  TV VASGIGSH++  VA
Sbjct: 143 ATTHNLSPALPRPLIFHPLTKTWSFGPTLSTPRRWCALGSLGPTVYVASGIGSHFSIHVA 202

Query: 150 RSVEKWALRKTESFDKRRRDSDGINWEKMRSLRTSKLCREAIDAVGWRGK 1
           RS++KW L+   +            WEK   L+  +  REAIDAVGW+ K
Sbjct: 203 RSLQKWNLQNPNAV-----------WEKKTELKDGRFSREAIDAVGWKQK 241


>ref|XP_002531898.1| conserved hypothetical protein [Ricinus communis]
           gi|223528465|gb|EEF30497.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 399

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/111 (52%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
 Frame = -3

Query: 330 ATSGHLLPALPRPLIFNPLTKTWSSGPPLSTPRRWCAAGAL-RGTVVVASGIGSHYTQAV 154
           AT+ +  PAL RP IFNP+++ WS GPPL+TPRRWCAAGA+   TV VASGIGS ++  +
Sbjct: 146 ATTDNFYPALSRPFIFNPVSRRWSFGPPLTTPRRWCAAGAINNSTVYVASGIGSQFSADI 205

Query: 153 ARSVEKWALRKTESFDKRRRDSDGINWEKMRSLRTSKLCREAIDAVGWRGK 1
           A+SVEKW   + E   +    S    WEK++ L+  +  R+AIDA+GWRGK
Sbjct: 206 AKSVEKWEFLRDEKRTRSSNQSCLWKWEKVKGLKDGRFSRDAIDAIGWRGK 256


Top